Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   K7G42_RS03165 Genome accession   NZ_CP082783
Coordinates   561046..561807 (+) Length   253 a.a.
NCBI ID   WP_004234647.1    Uniprot ID   A0ABN0IUF1
Organism   Streptococcus parauberis strain KRS02083     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 556046..566807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7G42_RS03135 (K7G42_03095) - 556162..556569 (+) 408 WP_003105517.1 diacylglycerol kinase family protein -
  K7G42_RS03140 (K7G42_03100) era 556583..557482 (+) 900 WP_003106308.1 GTPase Era -
  K7G42_RS03145 (K7G42_03105) - 557667..558143 (+) 477 WP_003106309.1 NUDIX hydrolase -
  K7G42_RS03150 (K7G42_03110) - 558288..558677 (+) 390 WP_003106311.1 hypothetical protein -
  K7G42_RS03155 (K7G42_03115) - 558735..559298 (+) 564 WP_004234651.1 hypothetical protein -
  K7G42_RS03160 (K7G42_03120) - 560128..560760 (+) 633 WP_004234648.1 ATP-binding cassette domain-containing protein -
  K7G42_RS03165 (K7G42_03125) comE/blpR 561046..561807 (+) 762 WP_004234647.1 response regulator transcription factor Regulator
  K7G42_RS03170 (K7G42_03135) - 562226..562513 (+) 288 WP_003106321.1 bacteriocin immunity protein -
  K7G42_RS03175 (K7G42_03140) mutM 562869..563693 (+) 825 WP_037619770.1 DNA-formamidopyrimidine glycosylase -
  K7G42_RS03180 (K7G42_03145) coaE 563686..564276 (+) 591 WP_004234645.1 dephospho-CoA kinase -
  K7G42_RS03185 (K7G42_03150) - 564284..564940 (+) 657 WP_003103741.1 YitT family protein -
  K7G42_RS03190 (K7G42_03155) - 565061..566563 (+) 1503 WP_037619776.1 helicase HerA-like domain-containing protein -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29732.10 Da        Isoelectric Point: 6.8700

>NTDB_id=529210 K7G42_RS03165 WP_004234647.1 561046..561807(+) (comE/blpR) [Streptococcus parauberis strain KRS02083]
MNIFVLEDVIRQQLHMETVIEKVLNQNNWFCNQLEFFGRGEQLLDHVNEKGNHQLFFLDIEIHQNKIKGLEIAKSIREND
PYATIIFVSNHVELIPLVFKYQIKALDLINKKLAYEEFEERIYATIKHVQNNNNCDLSDECFIFDSKQAHIHIPYYQLLF
VDTSGASHNLILHSLYGQIEIKGTLLQVLESEPRLFRCHRSFVINLSNVVSIDKQNRIITFKNGSKCDISRDKVKEVIKG
RTYYSCFFQGKDY

Nucleotide


Download         Length: 762 bp        

>NTDB_id=529210 K7G42_RS03165 WP_004234647.1 561046..561807(+) (comE/blpR) [Streptococcus parauberis strain KRS02083]
ATGAATATATTCGTATTAGAAGATGTCATTCGTCAGCAGTTACATATGGAGACAGTAATCGAAAAAGTTCTCAATCAAAA
TAATTGGTTTTGTAACCAATTAGAATTTTTTGGACGAGGTGAGCAACTATTAGATCATGTCAATGAAAAAGGTAATCATC
AATTATTTTTTCTTGACATTGAAATTCATCAAAACAAGATAAAAGGTCTCGAGATTGCTAAATCAATTAGGGAGAATGAT
CCTTACGCAACAATTATTTTTGTTTCAAATCATGTCGAATTGATACCTCTTGTTTTTAAATATCAAATCAAAGCATTAGA
TTTGATTAATAAAAAGTTGGCTTATGAGGAATTTGAAGAGCGAATTTATGCAACAATTAAACATGTTCAGAATAATAACA
ATTGTGACTTATCCGATGAATGTTTCATTTTTGATTCAAAACAAGCTCATATACATATTCCTTATTATCAGCTGTTATTT
GTTGATACTTCAGGAGCATCCCATAATCTTATTTTACATTCTTTATATGGACAAATTGAGATCAAAGGAACCTTATTACA
GGTATTAGAAAGTGAACCAAGATTATTTCGGTGTCATAGATCATTTGTAATTAATTTAAGTAATGTGGTAAGTATTGATA
AACAAAATAGAATTATCACATTCAAAAATGGTAGCAAATGTGATATTTCTAGAGACAAAGTTAAAGAAGTCATAAAAGGA
AGAACGTATTATTCTTGTTTTTTTCAAGGAAAAGATTATTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(16-122)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

41.597

94.071

0.391
  comE/comE1 Streptococcus equinus JB1

39.916

94.071

0.375