Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   JKL50_RS07395 Genome accession   NZ_CP068389
Coordinates   1400865..1401443 (-) Length   192 a.a.
NCBI ID   WP_017366958.1    Uniprot ID   A0A5D4P9G2
Organism   Bacillus altitudinis strain ws31     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1395865..1406443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKL50_RS07375 (JKL50_07375) - 1396048..1397217 (-) 1170 WP_135226755.1 MFS transporter -
  JKL50_RS07380 (JKL50_07380) - 1397361..1398800 (+) 1440 WP_202734583.1 PLP-dependent aminotransferase family protein -
  JKL50_RS07385 (JKL50_07385) - 1398831..1399313 (-) 483 WP_007499155.1 hypothetical protein -
  JKL50_RS07390 (JKL50_07390) - 1399615..1400721 (-) 1107 WP_080995747.1 alanine racemase -
  JKL50_RS07395 (JKL50_07395) comK 1400865..1401443 (-) 579 WP_017366958.1 competence protein ComK Regulator
  JKL50_RS07400 (JKL50_07400) - 1401733..1401969 (+) 237 WP_008348804.1 IDEAL domain-containing protein -
  JKL50_RS07405 (JKL50_07405) - 1402028..1402888 (-) 861 WP_202734584.1 SDR family oxidoreductase -
  JKL50_RS07410 (JKL50_07410) - 1403031..1404563 (+) 1533 WP_202734585.1 FAD-dependent oxidoreductase -
  JKL50_RS07415 (JKL50_07415) - 1404589..1405950 (+) 1362 WP_370539267.1 globin-coupled sensor protein -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22348.40 Da        Isoelectric Point: 8.7996

>NTDB_id=528833 JKL50_RS07395 WP_017366958.1 1400865..1401443(-) (comK) [Bacillus altitudinis strain ws31]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=528833 JKL50_RS07395 WP_017366958.1 1400865..1401443(-) (comK) [Bacillus altitudinis strain ws31]
GTGTCAGGAATTAGTGAAACACCATTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCGCTGCAAATTATAGAACGCA
GTTGCAGGTTCTTTGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCCCACAAGCCTCCC
ATCGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCATATAAGTCATTTGAGAGTCAGGTACACCGAACAGCGTACCTCCGAACGAAATTTCAAGATCGACTTGATGGA
GGTCTTCCTAAGAAACAAGAATTTATGCTGTATCCAAAGGAACAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5D4P9G2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

61.458

100

0.615