Detailed information NTG0528390

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K7X33_RS21495
• Genome accession: NZ_CP082355
• Coordinates: 4522064..4523089 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain VCSW5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4517064..4528089

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7X33_RS21475 (K7X33_21475)	metJ	4518249..4518566 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K7X33_RS21480 (K7X33_21480)	yiiX	4518626..4519234 (+)	609	WP_000702310.1	YiiX family permuted papain-like enzyme	-
K7X33_RS21485 (K7X33_21485)	rpmE	4519295..4519507 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K7X33_RS21490 (K7X33_21490)	priA	4519710..4521908 (+)	2199	WP_001309112.1	primosomal protein N'	Machinery gene
K7X33_RS21495 (K7X33_21495)	cytR	4522064..4523089 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K7X33_RS21500 (K7X33_21500)	ftsN	4523181..4524140 (+)	960	WP_000068834.1	cell division protein FtsN	-
K7X33_RS21505 (K7X33_21505)	hslV	4524233..4524763 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K7X33_RS21510 (K7X33_21510)	hslU	4524773..4526104 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K7X33_RS21515 (K7X33_21515)	menA	4526171..4527097 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K7X33_RS21520 (K7X33_21520)	rraA	4527190..4527675 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K7X33_RS21525 (K7X33_21525)	zapB	4527760..4528005 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=528390 K7X33_RS21495 WP_000644904.1 4522064..4523089(+) (cytR) [Escherichia coli strain VCSW5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=528390 K7X33_RS21495 WP_000644904.1 4522064..4523089(+) (cytR) [Escherichia coli strain VCSW5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAACCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTTGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628