Detailed information NTG0528231

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6983_RS21470
• Genome accession: NZ_CP082327
• Coordinates: 4426371..4427396 (+)
• Length: 341 a.a.
• NCBI ID: WP_001550015.1
• Uniprot ID: -
• Organism: Escherichia coli strain B2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4421371..4432396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6983_RS21450 (K6983_21375)	metJ	4422432..4422749 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K6983_RS21455 (K6983_21380)	yiiX	4422933..4423541 (+)	609	WP_121282494.1	YiiX family permuted papain-like enzyme	-
K6983_RS21460 (K6983_21385)	rpmE	4423602..4423814 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K6983_RS21465 (K6983_21390)	priA	4424017..4426215 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
K6983_RS21470 (K6983_21395)	cytR	4426371..4427396 (+)	1026	WP_001550015.1	DNA-binding transcriptional regulator CytR	Regulator
K6983_RS21475 (K6983_21400)	ftsN	4427488..4428447 (+)	960	WP_000068828.1	cell division protein FtsN	-
K6983_RS21480 (K6983_21405)	hslV	4428540..4429070 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6983_RS21485 (K6983_21410)	hslU	4429080..4430411 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K6983_RS21490 (K6983_21415)	menA	4430478..4431404 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6983_RS21495 (K6983_21420)	rraA	4431497..4431982 (+)	486	WP_112934367.1	ribonuclease E activity regulator RraA	-
K6983_RS21500 (K6983_21425)	zapB	4432067..4432312 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37818.84 Da
• Isoelectric Point: 6.8163

>NTDB_id=528231 K6983_RS21470 WP_001550015.1 4426371..4427396(+) (cytR) [Escherichia coli strain B2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYKQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=528231 K6983_RS21470 WP_001550015.1 4426371..4427396(+) (cytR) [Escherichia coli strain B2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATAAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628