Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | I6J09_RS00295 | Genome accession | NZ_CP068216 |
| Coordinates | 64368..65237 (+) | Length | 289 a.a. |
| NCBI ID | WP_017638386.1 | Uniprot ID | - |
| Organism | Staphylococcus pasteuri strain FDAARGOS_1152 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 29588..101512 | 64368..65237 | within | 0 |
Gene organization within MGE regions
Location: 29588..101512
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J09_RS00150 (I6J09_00150) | - | 30438..31181 (+) | 744 | WP_017637137.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| I6J09_RS00155 (I6J09_00155) | pknB | 31178..33190 (+) | 2013 | WP_208969879.1 | Stk1 family PASTA domain-containing Ser/Thr kinase | - |
| I6J09_RS00160 (I6J09_00160) | rsgA | 33331..34206 (+) | 876 | WP_046466600.1 | ribosome small subunit-dependent GTPase A | - |
| I6J09_RS00165 (I6J09_00165) | rpe | 34207..34851 (+) | 645 | WP_017637134.1 | ribulose-phosphate 3-epimerase | - |
| I6J09_RS00170 (I6J09_00170) | - | 34857..35501 (+) | 645 | WP_029055459.1 | thiamine diphosphokinase | - |
| I6J09_RS00175 (I6J09_00175) | rpmB | 35666..35854 (-) | 189 | WP_002435210.1 | 50S ribosomal protein L28 | - |
| I6J09_RS00180 (I6J09_00180) | - | 36162..36536 (+) | 375 | WP_017637132.1 | Asp23/Gls24 family envelope stress response protein | - |
| I6J09_RS00185 (I6J09_00185) | fakA | 36551..38200 (+) | 1650 | WP_017637131.1 | fatty acid kinase catalytic subunit FakA | - |
| I6J09_RS00190 (I6J09_00190) | recG | 38446..40494 (+) | 2049 | WP_208969880.1 | ATP-dependent DNA helicase RecG | - |
| I6J09_RS00195 (I6J09_00195) | fapR | 40643..41212 (+) | 570 | WP_017637129.1 | transcription factor FapR | - |
| I6J09_RS00200 (I6J09_00200) | plsX | 41205..42191 (+) | 987 | WP_208969881.1 | phosphate acyltransferase PlsX | - |
| I6J09_RS00205 (I6J09_00205) | fabD | 42184..43104 (+) | 921 | WP_117239298.1 | ACP S-malonyltransferase | - |
| I6J09_RS00210 (I6J09_00210) | fabG | 43104..43838 (+) | 735 | WP_029055455.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| I6J09_RS00215 (I6J09_00215) | - | 44172..44405 (+) | 234 | WP_000426914.1 | acyl carrier protein | - |
| I6J09_RS00220 (I6J09_00220) | rnc | 44516..45244 (+) | 729 | WP_017637125.1 | ribonuclease III | - |
| I6J09_RS00225 (I6J09_00225) | smc | 45391..48960 (+) | 3570 | WP_208969882.1 | chromosome segregation protein SMC | - |
| I6J09_RS00230 (I6J09_00230) | ftsY | 48957..50204 (+) | 1248 | WP_017637123.1 | signal recognition particle-docking protein FtsY | - |
| I6J09_RS00235 (I6J09_00235) | - | 50191..50523 (+) | 333 | WP_046466606.1 | putative DNA-binding protein | - |
| I6J09_RS00240 (I6J09_00240) | ffh | 50543..51910 (+) | 1368 | WP_029055452.1 | signal recognition particle protein | - |
| I6J09_RS00245 (I6J09_00245) | rpsP | 52509..52784 (+) | 276 | WP_017637120.1 | 30S ribosomal protein S16 | - |
| I6J09_RS00250 (I6J09_00250) | rimM | 52951..53454 (+) | 504 | WP_017637119.1 | ribosome maturation factor RimM | - |
| I6J09_RS00255 (I6J09_00255) | trmD | 53454..54191 (+) | 738 | WP_017637118.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| I6J09_RS00260 (I6J09_00260) | rplS | 54298..54648 (+) | 351 | WP_017637117.1 | 50S ribosomal protein L19 | - |
| I6J09_RS00265 (I6J09_00265) | - | 54839..57448 (-) | 2610 | WP_208969883.1 | YfhO family protein | - |
| I6J09_RS00270 (I6J09_00270) | - | 57441..60041 (-) | 2601 | WP_208969884.1 | YfhO family protein | - |
| I6J09_RS00275 (I6J09_00275) | ylqF | 60303..61178 (+) | 876 | WP_119622627.1 | ribosome biogenesis GTPase YlqF | - |
| I6J09_RS00280 (I6J09_00280) | - | 61171..61938 (+) | 768 | WP_208969885.1 | ribonuclease HII | - |
| I6J09_RS00285 (I6J09_00285) | sucC | 62050..63216 (+) | 1167 | WP_017638388.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| I6J09_RS00290 (I6J09_00290) | sucD | 63238..64143 (+) | 906 | WP_017638387.1 | succinate--CoA ligase subunit alpha | - |
| I6J09_RS00295 (I6J09_00295) | dprA | 64368..65237 (+) | 870 | WP_017638386.1 | DNA-processing protein DprA | Machinery gene |
| I6J09_RS00300 (I6J09_00300) | topA | 65415..67490 (+) | 2076 | WP_026083538.1 | type I DNA topoisomerase | - |
| I6J09_RS00305 (I6J09_00305) | trmFO | 67603..68910 (+) | 1308 | WP_029055445.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| I6J09_RS00310 (I6J09_00310) | xerC | 69076..69966 (+) | 891 | WP_017638383.1 | tyrosine recombinase XerC | - |
| I6J09_RS00315 (I6J09_00315) | hslV | 69970..70512 (+) | 543 | WP_017638382.1 | ATP-dependent protease subunit HslV | - |
| I6J09_RS00320 (I6J09_00320) | hslU | 70603..72006 (+) | 1404 | WP_017638381.1 | ATP-dependent protease ATPase subunit HslU | - |
| I6J09_RS00325 (I6J09_00325) | codY | 72030..72803 (+) | 774 | WP_017638380.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| I6J09_RS00330 (I6J09_00330) | rpsB | 73097..73885 (+) | 789 | WP_029055444.1 | 30S ribosomal protein S2 | - |
| I6J09_RS00335 (I6J09_00335) | tsf | 74037..74915 (+) | 879 | WP_017638378.1 | translation elongation factor Ts | - |
| I6J09_RS00340 (I6J09_00340) | pyrH | 75054..75776 (+) | 723 | WP_017638377.1 | UMP kinase | - |
| I6J09_RS00345 (I6J09_00345) | frr | 75792..76346 (+) | 555 | WP_017638376.1 | ribosome recycling factor | - |
| I6J09_RS00350 (I6J09_00350) | - | 76577..77347 (+) | 771 | WP_046466612.1 | isoprenyl transferase | - |
| I6J09_RS00355 (I6J09_00355) | - | 77354..78136 (+) | 783 | WP_017638374.1 | phosphatidate cytidylyltransferase | - |
| I6J09_RS00360 (I6J09_00360) | rseP | 78379..79665 (+) | 1287 | WP_154894721.1 | RIP metalloprotease RseP | - |
| I6J09_RS00365 (I6J09_00365) | - | 79685..81385 (+) | 1701 | WP_208969886.1 | proline--tRNA ligase | - |
| I6J09_RS00370 (I6J09_00370) | - | 81671..85981 (+) | 4311 | WP_117239353.1 | PolC-type DNA polymerase III | - |
| I6J09_RS00375 (I6J09_00375) | rimP | 86179..86646 (+) | 468 | WP_017638370.1 | ribosome maturation factor RimP | - |
| I6J09_RS00380 (I6J09_00380) | nusA | 86667..87899 (+) | 1233 | WP_017638369.1 | transcription termination factor NusA | - |
| I6J09_RS00385 (I6J09_00385) | rnpM | 87919..88203 (+) | 285 | WP_017638368.1 | RNase P modulator RnpM | - |
| I6J09_RS00390 (I6J09_00390) | - | 88203..88517 (+) | 315 | WP_017638367.1 | L7Ae/L30e/S12e/Gadd45 family ribosomal protein | - |
| I6J09_RS00395 (I6J09_00395) | infB | 88522..90696 (+) | 2175 | WP_046466616.1 | translation initiation factor IF-2 | - |
| I6J09_RS00400 (I6J09_00400) | rbfA | 90828..91178 (+) | 351 | WP_017638365.1 | 30S ribosome-binding factor RbfA | - |
| I6J09_RS00405 (I6J09_00405) | truB | 91342..92259 (+) | 918 | WP_029055439.1 | tRNA pseudouridine(55) synthase TruB | - |
| I6J09_RS00410 (I6J09_00410) | ribF | 92272..93243 (+) | 972 | WP_029055438.1 | riboflavin biosynthesis protein RibF | - |
| I6J09_RS00415 (I6J09_00415) | rpsO | 93356..93625 (+) | 270 | WP_046466617.1 | 30S ribosomal protein S15 | - |
| I6J09_RS00420 (I6J09_00420) | pnp | 93761..95860 (+) | 2100 | WP_017638361.1 | polyribonucleotide nucleotidyltransferase | - |
| I6J09_RS00425 (I6J09_00425) | rnjB | 96034..97707 (+) | 1674 | WP_208969887.1 | ribonuclease J2 | - |
| I6J09_RS00430 (I6J09_00430) | - | 97962..100364 (+) | 2403 | WP_108016798.1 | DNA translocase FtsK | - |
| I6J09_RS00435 (I6J09_00435) | - | 100367..101080 (+) | 714 | WP_017638358.1 | GntR family transcriptional regulator | - |
Sequence
Protein
Download Length: 289 a.a. Molecular weight: 33585.48 Da Isoelectric Point: 8.9572
>NTDB_id=528125 I6J09_RS00295 WP_017638386.1 64368..65237(+) (dprA) [Staphylococcus pasteuri strain FDAARGOS_1152]
MNKHFLLKLYWAQFTTSQIHQLNQYYPQLFHVNDYEQESLLHCWITQYQPRLLPKFLDYKQFQYNEIMKVLRQLDINYIT
YFDKDYPYLLKEIYDYPFVLFYKGNKDILKNDKTLAIVGARKCTNYTSQALNYLFPSFKRAQLTIVSGLAAGADSEAHQQ
ALNAYLPTIAVLGYGHTHHYPKSTFSLRKKIEEQGIVISEYPPFSPIAKYKFPARNRLISGLSKGVLLTEANERSGSRIT
IDCALEQNRNVYVLPGKIFDTSTKGNLLLHQEGATIVVNEHDILQDYSI
MNKHFLLKLYWAQFTTSQIHQLNQYYPQLFHVNDYEQESLLHCWITQYQPRLLPKFLDYKQFQYNEIMKVLRQLDINYIT
YFDKDYPYLLKEIYDYPFVLFYKGNKDILKNDKTLAIVGARKCTNYTSQALNYLFPSFKRAQLTIVSGLAAGADSEAHQQ
ALNAYLPTIAVLGYGHTHHYPKSTFSLRKKIEEQGIVISEYPPFSPIAKYKFPARNRLISGLSKGVLLTEANERSGSRIT
IDCALEQNRNVYVLPGKIFDTSTKGNLLLHQEGATIVVNEHDILQDYSI
Nucleotide
Download Length: 870 bp
>NTDB_id=528125 I6J09_RS00295 WP_017638386.1 64368..65237(+) (dprA) [Staphylococcus pasteuri strain FDAARGOS_1152]
TTGAACAAACATTTTTTACTTAAATTATACTGGGCTCAGTTTACTACTTCACAAATACATCAACTCAACCAATATTATCC
ACAGCTCTTTCATGTTAATGATTATGAACAAGAATCGTTATTACATTGTTGGATTACTCAATACCAGCCACGATTATTGC
CTAAGTTCCTTGACTACAAACAATTTCAATATAATGAAATTATGAAAGTTCTTCGACAATTAGATATCAACTATATCACC
TATTTTGATAAAGATTATCCCTATTTATTAAAAGAAATATATGATTATCCTTTTGTCTTATTTTATAAGGGTAATAAAGA
CATTTTAAAAAACGATAAAACTTTAGCTATAGTTGGTGCTAGAAAGTGTACAAACTATACAAGCCAAGCACTTAATTATC
TTTTTCCTTCATTTAAAAGGGCTCAACTTACAATTGTATCTGGTCTTGCTGCAGGAGCAGATAGTGAGGCACATCAACAA
GCATTGAATGCCTATTTGCCTACAATTGCTGTATTAGGTTATGGACATACACATCATTATCCAAAATCTACTTTTTCACT
TAGAAAGAAAATTGAAGAACAAGGTATTGTTATTAGCGAATATCCACCATTTTCTCCAATAGCGAAATATAAATTTCCTG
CAAGGAACAGATTGATTAGTGGTTTATCAAAAGGTGTTTTACTAACTGAAGCAAATGAAAGAAGTGGAAGTCGTATTACT
ATAGATTGTGCACTTGAACAAAATCGAAATGTCTATGTATTACCTGGAAAAATATTTGATACCTCAACAAAAGGGAATTT
ATTATTGCATCAAGAAGGCGCAACGATTGTTGTGAATGAACATGATATCTTACAAGACTATTCAATTTAA
TTGAACAAACATTTTTTACTTAAATTATACTGGGCTCAGTTTACTACTTCACAAATACATCAACTCAACCAATATTATCC
ACAGCTCTTTCATGTTAATGATTATGAACAAGAATCGTTATTACATTGTTGGATTACTCAATACCAGCCACGATTATTGC
CTAAGTTCCTTGACTACAAACAATTTCAATATAATGAAATTATGAAAGTTCTTCGACAATTAGATATCAACTATATCACC
TATTTTGATAAAGATTATCCCTATTTATTAAAAGAAATATATGATTATCCTTTTGTCTTATTTTATAAGGGTAATAAAGA
CATTTTAAAAAACGATAAAACTTTAGCTATAGTTGGTGCTAGAAAGTGTACAAACTATACAAGCCAAGCACTTAATTATC
TTTTTCCTTCATTTAAAAGGGCTCAACTTACAATTGTATCTGGTCTTGCTGCAGGAGCAGATAGTGAGGCACATCAACAA
GCATTGAATGCCTATTTGCCTACAATTGCTGTATTAGGTTATGGACATACACATCATTATCCAAAATCTACTTTTTCACT
TAGAAAGAAAATTGAAGAACAAGGTATTGTTATTAGCGAATATCCACCATTTTCTCCAATAGCGAAATATAAATTTCCTG
CAAGGAACAGATTGATTAGTGGTTTATCAAAAGGTGTTTTACTAACTGAAGCAAATGAAAGAAGTGGAAGTCGTATTACT
ATAGATTGTGCACTTGAACAAAATCGAAATGTCTATGTATTACCTGGAAAAATATTTGATACCTCAACAAAAGGGAATTT
ATTATTGCATCAAGAAGGCGCAACGATTGTTGTGAATGAACATGATATCTTACAAGACTATTCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Staphylococcus aureus MW2 |
58.276 |
100 |
0.585 |
| dprA | Staphylococcus aureus N315 |
58.276 |
100 |
0.585 |