Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | K7H19_RS02815 | Genome accession | NZ_CP082323 |
| Coordinates | 506575..508785 (-) | Length | 736 a.a. |
| NCBI ID | WP_011172629.1 | Uniprot ID | Q72L86 |
| Organism | Thermus thermophilus strain N-1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 501575..513785
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K7H19_RS02795 (K7H19_02795) | sucC | 502038..503213 (-) | 1176 | WP_011228010.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| K7H19_RS02800 (K7H19_02800) | - | 503258..504292 (+) | 1035 | WP_011228011.1 | bis-aminopropyl spermidine synthase family protein | - |
| K7H19_RS02805 (K7H19_02805) | - | 504286..505296 (-) | 1011 | WP_011228012.1 | PIN/TRAM domain-containing protein | - |
| K7H19_RS02810 (K7H19_02810) | radA | 505293..506564 (-) | 1272 | WP_011228013.1 | DNA repair protein RadA | Machinery gene |
| K7H19_RS02815 (K7H19_02815) | clpC | 506575..508785 (-) | 2211 | WP_011172629.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| K7H19_RS02820 (K7H19_02820) | - | 508914..510434 (+) | 1521 | WP_011228014.1 | glycine--tRNA ligase | - |
| K7H19_RS02825 (K7H19_02825) | - | 510615..510851 (+) | 237 | WP_011172631.1 | hypothetical protein | - |
| K7H19_RS02830 (K7H19_02830) | - | 510848..511843 (+) | 996 | WP_011228015.1 | aspartate-semialdehyde dehydrogenase | - |
| K7H19_RS02835 (K7H19_02835) | - | 511830..512537 (-) | 708 | WP_011228016.1 | TlyA family rRNA (cytidine-2'-O)-methyltransferase | - |
| K7H19_RS02840 (K7H19_02840) | - | 512555..512866 (+) | 312 | WP_011228017.1 | DUF3234 domain-containing protein | - |
| K7H19_RS02845 (K7H19_02845) | - | 512859..513287 (+) | 429 | WP_011228018.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 736 a.a. Molecular weight: 81424.36 Da Isoelectric Point: 5.4038
>NTDB_id=528125 K7H19_RS02815 WP_011172629.1 506575..508785(-) (clpC) [Thermus thermophilus strain N-1]
MNRYDDRARLVFHYAREEGSRLGHSMIGPEHLLLGLMREGGTAARILQEYGASLEAMRRMVEELVGRGEGGRTGEPPAIT
PRARRVMELASAEARNMGSPVIGTEHILLGIIREGDGIAYRILSHFAKDVDAIRWRVLAMAEGREREKPVNTPFLDEYGR
DLTKEAREGKLDPVIGRQEEINRVIQILARRTKNNPVLIGDPGVGKTAIVEGLAQAIVEGRVPPILKGARVVAIDLAGVV
AGTKYRGEFEERLRQIIEELKNAKVIAFIDELHTLIGAGGAEGTLDAANILKPALARGEIQVIGATTTGEYHRYIEKDAA
LERRFQPVIVLEPSPEETLEILKGLRPRYEAHHGVIIPDEILELAVKIGIRSLPGRNFPDKAIDLIDEAASRVRLNASLG
LPVAEEEDGTPIVTREDVEAVVDSWGGVYVDDKDDEKLMRLEEELRKRVVGQEEAIRALANALRRARVGLGGRTRVAASF
LFVGQSGVGKTQLAKALAEVLFGSERALIRFDMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRRQPFSVVLLDEIEK
AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSNTGYNVGPAIGFTSKEVDTESPLKALFTPEFLDRLDEVIRFRP
LTEEELVRVAEMMLEDIRKELQARDVQVSFAPELARFLVDQAPKTGSARALRSVLRERIEDPLAVALLRKPTGRIHVSVE
GGQVAFHEVEGEELLV
MNRYDDRARLVFHYAREEGSRLGHSMIGPEHLLLGLMREGGTAARILQEYGASLEAMRRMVEELVGRGEGGRTGEPPAIT
PRARRVMELASAEARNMGSPVIGTEHILLGIIREGDGIAYRILSHFAKDVDAIRWRVLAMAEGREREKPVNTPFLDEYGR
DLTKEAREGKLDPVIGRQEEINRVIQILARRTKNNPVLIGDPGVGKTAIVEGLAQAIVEGRVPPILKGARVVAIDLAGVV
AGTKYRGEFEERLRQIIEELKNAKVIAFIDELHTLIGAGGAEGTLDAANILKPALARGEIQVIGATTTGEYHRYIEKDAA
LERRFQPVIVLEPSPEETLEILKGLRPRYEAHHGVIIPDEILELAVKIGIRSLPGRNFPDKAIDLIDEAASRVRLNASLG
LPVAEEEDGTPIVTREDVEAVVDSWGGVYVDDKDDEKLMRLEEELRKRVVGQEEAIRALANALRRARVGLGGRTRVAASF
LFVGQSGVGKTQLAKALAEVLFGSERALIRFDMSEFQEPHSISKLIGAPPGYVGYEQGGRLTEAVRRQPFSVVLLDEIEK
AHPDIYNTFLQVLDEGRLTDGMGRTVDFRRVILIMTSNTGYNVGPAIGFTSKEVDTESPLKALFTPEFLDRLDEVIRFRP
LTEEELVRVAEMMLEDIRKELQARDVQVSFAPELARFLVDQAPKTGSARALRSVLRERIEDPLAVALLRKPTGRIHVSVE
GGQVAFHEVEGEELLV
Nucleotide
Download Length: 2211 bp
>NTDB_id=528125 K7H19_RS02815 WP_011172629.1 506575..508785(-) (clpC) [Thermus thermophilus strain N-1]
ATGAACCGATACGACGACCGCGCCAGGCTGGTCTTTCACTACGCAAGAGAGGAGGGGAGCCGCTTAGGCCACTCCATGAT
CGGCCCGGAGCACCTCCTCCTGGGCCTGATGCGCGAGGGGGGGACGGCGGCCCGCATCCTCCAGGAGTACGGCGCGAGCC
TCGAGGCCATGCGCCGCATGGTGGAGGAGCTGGTGGGCCGGGGGGAGGGCGGGCGCACCGGGGAGCCCCCCGCCATCACC
CCGAGGGCGAGGCGGGTCATGGAGCTCGCCAGCGCCGAGGCCCGCAACATGGGCTCCCCCGTCATCGGCACGGAGCACAT
CCTCCTCGGCATCATCCGGGAGGGGGACGGGATCGCCTACCGCATCCTCAGCCACTTCGCCAAGGACGTGGACGCCATCC
GCTGGAGGGTCCTGGCCATGGCCGAGGGCCGCGAGCGGGAAAAGCCTGTGAACACCCCCTTCCTGGACGAGTACGGCCGC
GACCTCACCAAGGAGGCCCGGGAAGGAAAGCTGGACCCGGTGATCGGCCGCCAGGAGGAGATCAACCGGGTGATCCAGAT
CCTCGCCCGGCGCACCAAGAACAATCCCGTGCTCATCGGCGACCCCGGGGTGGGCAAGACGGCCATCGTGGAGGGCCTGG
CCCAGGCCATCGTGGAGGGCCGGGTCCCCCCCATCCTCAAGGGGGCCCGGGTGGTGGCCATTGACCTCGCCGGGGTGGTG
GCGGGGACCAAGTACCGGGGCGAGTTTGAGGAGCGCCTGCGGCAGATCATTGAGGAGCTCAAGAACGCCAAGGTCATCGC
CTTCATTGACGAGCTCCACACCCTGATCGGGGCGGGCGGGGCCGAGGGCACCCTGGACGCCGCCAACATCCTCAAGCCCG
CCCTGGCCCGCGGGGAGATCCAGGTGATCGGGGCCACCACCACCGGGGAGTACCACCGCTACATAGAGAAGGACGCGGCC
CTGGAGCGGCGCTTCCAGCCGGTGATCGTCCTCGAGCCTTCCCCGGAGGAGACCCTGGAGATCCTCAAGGGCCTCCGCCC
CCGGTACGAGGCCCACCACGGGGTGATCATCCCCGACGAGATCCTGGAGCTTGCGGTGAAGATCGGGATCCGCTCGCTTC
CCGGGCGCAACTTCCCCGACAAGGCCATTGACCTCATTGACGAGGCGGCCTCGAGGGTGCGCCTGAACGCCTCCTTGGGC
CTCCCCGTGGCGGAGGAAGAGGACGGCACCCCCATCGTCACCCGGGAGGACGTGGAGGCGGTGGTGGACTCCTGGGGCGG
GGTCTACGTGGACGACAAGGACGACGAGAAGCTCATGCGCCTGGAGGAGGAGCTCAGGAAGCGGGTGGTGGGCCAGGAGG
AGGCCATCCGCGCCCTGGCGAACGCCCTCCGCCGGGCCCGGGTGGGGCTTGGGGGAAGGACCCGGGTGGCGGCGAGCTTC
CTCTTCGTGGGGCAAAGCGGCGTGGGCAAGACCCAGCTCGCCAAGGCCCTGGCCGAGGTCCTCTTCGGCTCGGAGAGGGC
CCTCATCCGCTTTGACATGTCCGAGTTCCAGGAGCCCCACTCCATCTCCAAGCTCATCGGGGCCCCGCCGGGCTATGTGG
GCTACGAGCAGGGGGGCCGCCTCACCGAGGCCGTGCGCCGCCAGCCCTTCAGCGTGGTCCTCCTGGACGAGATTGAGAAG
GCCCACCCCGACATCTACAACACCTTCCTCCAGGTGCTGGACGAGGGCCGCCTCACGGACGGCATGGGCCGCACCGTGGA
CTTCCGCCGGGTCATCCTCATCATGACCTCCAACACCGGCTACAACGTGGGCCCCGCCATCGGCTTCACCTCCAAGGAGG
TGGACACGGAGTCCCCCCTGAAGGCCCTCTTCACCCCCGAGTTTCTGGACCGGCTGGACGAGGTCATCCGCTTCCGGCCC
CTCACGGAGGAGGAGCTGGTGCGGGTGGCCGAGATGATGCTGGAGGACATCCGCAAGGAGCTCCAGGCCCGGGACGTCCA
GGTGAGCTTCGCCCCCGAATTGGCCCGCTTCCTGGTGGACCAGGCCCCCAAGACGGGGAGCGCCCGCGCCCTGCGGAGCG
TCCTAAGGGAGCGCATAGAGGACCCCTTGGCCGTCGCCCTCCTGCGGAAGCCCACGGGCCGGATCCACGTGAGCGTGGAG
GGAGGCCAGGTGGCCTTCCACGAGGTGGAGGGGGAGGAGCTCCTCGTCTAG
ATGAACCGATACGACGACCGCGCCAGGCTGGTCTTTCACTACGCAAGAGAGGAGGGGAGCCGCTTAGGCCACTCCATGAT
CGGCCCGGAGCACCTCCTCCTGGGCCTGATGCGCGAGGGGGGGACGGCGGCCCGCATCCTCCAGGAGTACGGCGCGAGCC
TCGAGGCCATGCGCCGCATGGTGGAGGAGCTGGTGGGCCGGGGGGAGGGCGGGCGCACCGGGGAGCCCCCCGCCATCACC
CCGAGGGCGAGGCGGGTCATGGAGCTCGCCAGCGCCGAGGCCCGCAACATGGGCTCCCCCGTCATCGGCACGGAGCACAT
CCTCCTCGGCATCATCCGGGAGGGGGACGGGATCGCCTACCGCATCCTCAGCCACTTCGCCAAGGACGTGGACGCCATCC
GCTGGAGGGTCCTGGCCATGGCCGAGGGCCGCGAGCGGGAAAAGCCTGTGAACACCCCCTTCCTGGACGAGTACGGCCGC
GACCTCACCAAGGAGGCCCGGGAAGGAAAGCTGGACCCGGTGATCGGCCGCCAGGAGGAGATCAACCGGGTGATCCAGAT
CCTCGCCCGGCGCACCAAGAACAATCCCGTGCTCATCGGCGACCCCGGGGTGGGCAAGACGGCCATCGTGGAGGGCCTGG
CCCAGGCCATCGTGGAGGGCCGGGTCCCCCCCATCCTCAAGGGGGCCCGGGTGGTGGCCATTGACCTCGCCGGGGTGGTG
GCGGGGACCAAGTACCGGGGCGAGTTTGAGGAGCGCCTGCGGCAGATCATTGAGGAGCTCAAGAACGCCAAGGTCATCGC
CTTCATTGACGAGCTCCACACCCTGATCGGGGCGGGCGGGGCCGAGGGCACCCTGGACGCCGCCAACATCCTCAAGCCCG
CCCTGGCCCGCGGGGAGATCCAGGTGATCGGGGCCACCACCACCGGGGAGTACCACCGCTACATAGAGAAGGACGCGGCC
CTGGAGCGGCGCTTCCAGCCGGTGATCGTCCTCGAGCCTTCCCCGGAGGAGACCCTGGAGATCCTCAAGGGCCTCCGCCC
CCGGTACGAGGCCCACCACGGGGTGATCATCCCCGACGAGATCCTGGAGCTTGCGGTGAAGATCGGGATCCGCTCGCTTC
CCGGGCGCAACTTCCCCGACAAGGCCATTGACCTCATTGACGAGGCGGCCTCGAGGGTGCGCCTGAACGCCTCCTTGGGC
CTCCCCGTGGCGGAGGAAGAGGACGGCACCCCCATCGTCACCCGGGAGGACGTGGAGGCGGTGGTGGACTCCTGGGGCGG
GGTCTACGTGGACGACAAGGACGACGAGAAGCTCATGCGCCTGGAGGAGGAGCTCAGGAAGCGGGTGGTGGGCCAGGAGG
AGGCCATCCGCGCCCTGGCGAACGCCCTCCGCCGGGCCCGGGTGGGGCTTGGGGGAAGGACCCGGGTGGCGGCGAGCTTC
CTCTTCGTGGGGCAAAGCGGCGTGGGCAAGACCCAGCTCGCCAAGGCCCTGGCCGAGGTCCTCTTCGGCTCGGAGAGGGC
CCTCATCCGCTTTGACATGTCCGAGTTCCAGGAGCCCCACTCCATCTCCAAGCTCATCGGGGCCCCGCCGGGCTATGTGG
GCTACGAGCAGGGGGGCCGCCTCACCGAGGCCGTGCGCCGCCAGCCCTTCAGCGTGGTCCTCCTGGACGAGATTGAGAAG
GCCCACCCCGACATCTACAACACCTTCCTCCAGGTGCTGGACGAGGGCCGCCTCACGGACGGCATGGGCCGCACCGTGGA
CTTCCGCCGGGTCATCCTCATCATGACCTCCAACACCGGCTACAACGTGGGCCCCGCCATCGGCTTCACCTCCAAGGAGG
TGGACACGGAGTCCCCCCTGAAGGCCCTCTTCACCCCCGAGTTTCTGGACCGGCTGGACGAGGTCATCCGCTTCCGGCCC
CTCACGGAGGAGGAGCTGGTGCGGGTGGCCGAGATGATGCTGGAGGACATCCGCAAGGAGCTCCAGGCCCGGGACGTCCA
GGTGAGCTTCGCCCCCGAATTGGCCCGCTTCCTGGTGGACCAGGCCCCCAAGACGGGGAGCGCCCGCGCCCTGCGGAGCG
TCCTAAGGGAGCGCATAGAGGACCCCTTGGCCGTCGCCCTCCTGCGGAAGCCCACGGGCCGGATCCACGTGAGCGTGGAG
GGAGGCCAGGTGGCCTTCCACGAGGTGGAGGGGGAGGAGCTCCTCGTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
48.02 |
100 |
0.527 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
42.588 |
100 |
0.461 |
| clpC | Streptococcus pneumoniae Rx1 |
41.762 |
100 |
0.444 |
| clpC | Streptococcus pneumoniae D39 |
41.762 |
100 |
0.444 |
| clpC | Streptococcus pneumoniae TIGR4 |
41.379 |
100 |
0.44 |
| clpC | Streptococcus thermophilus LMD-9 |
39.698 |
100 |
0.429 |
| clpC | Streptococcus thermophilus LMG 18311 |
39.447 |
100 |
0.427 |
| clpC | Streptococcus mutans UA159 |
39.544 |
100 |
0.424 |
| clpE | Streptococcus mutans UA159 |
48.445 |
83.016 |
0.402 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.463 |
83.016 |
0.394 |
| clpE | Streptococcus pneumoniae D39 |
47.222 |
83.152 |
0.393 |
| clpE | Streptococcus pneumoniae Rx1 |
47.222 |
83.152 |
0.393 |
| clpE | Streptococcus pneumoniae R6 |
47.222 |
83.152 |
0.393 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.059 |
83.152 |
0.391 |
| clpA | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
38.968 |
94.837 |
0.37 |