Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6J13_RS07055 Genome accession   NZ_CP068213
Coordinates   1442233..1443000 (+) Length   255 a.a.
NCBI ID   WP_003071657.1    Uniprot ID   U2YCD6
Organism   Streptococcus constellatus strain FDAARGOS_1156     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1437233..1448000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J13_RS07025 (I6J13_07025) comE 1437784..1438533 (-) 750 WP_003071650.1 competence system response regulator transcription factor ComE Regulator
  I6J13_RS07030 (I6J13_07030) comD/comD2 1438533..1439855 (-) 1323 WP_218028116.1 sensor histidine kinase Regulator
  I6J13_RS07035 (I6J13_07035) - 1439875..1440021 (-) 147 WP_006270349.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  I6J13_RS07045 (I6J13_07045) rlmH 1440304..1440783 (-) 480 WP_006270335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  I6J13_RS07050 (I6J13_07050) htrA 1440988..1442178 (+) 1191 WP_006270334.1 S1C family serine protease Regulator
  I6J13_RS07055 (I6J13_07055) spo0J 1442233..1443000 (+) 768 WP_003071657.1 ParB/RepB/Spo0J family partition protein Regulator
  I6J13_RS07060 (I6J13_07060) dnaA 1443229..1444572 (+) 1344 WP_006270358.1 chromosomal replication initiator protein DnaA -
  I6J13_RS07065 (I6J13_07065) dnaN 1444729..1445865 (+) 1137 WP_006268813.1 DNA polymerase III subunit beta -
  I6J13_RS07070 (I6J13_07070) - 1445865..1446062 (+) 198 WP_003071662.1 DUF951 domain-containing protein -
  I6J13_RS07075 (I6J13_07075) - 1446149..1446649 (-) 501 WP_006270333.1 YehR family lipoprotein -
  I6J13_RS07080 (I6J13_07080) ychF 1446796..1447911 (+) 1116 WP_006270350.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29713.19 Da        Isoelectric Point: 9.5149

>NTDB_id=528062 I6J13_RS07055 WP_003071657.1 1442233..1443000(+) (spo0J) [Streptococcus constellatus strain FDAARGOS_1156]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIAQTMGKSRPYITNSVRLLNLPLNIMEAIKEGRISQGHA
RLLINLSEKEQNQWFTKILSQELSVRQLEKQLHPHQKKTSAKNKYQLFLKEEENRLKKIFGTEISLQFSKQSQSGKICIH
FSSQEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=528062 I6J13_RS07055 WP_003071657.1 1442233..1443000(+) (spo0J) [Streptococcus constellatus strain FDAARGOS_1156]
ATGGAAAAATATCAATATATTACACTCAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCAATAATTGGTT
ATGAATTATTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACTAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATTATTGAAAATTTACAACGAGAAGACTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTAATTGACAAAGGGTTGACACACAAAGAAATCGCTCAAACAATGGGAAAATCACGTCCTTATATTA
CAAATTCTGTCCGTTTATTAAACTTACCTCTTAATATTATGGAAGCGATAAAAGAAGGAAGAATTTCTCAAGGACATGCT
CGTTTACTTATCAACTTATCAGAAAAAGAGCAAAATCAGTGGTTCACTAAAATCCTATCTCAAGAACTTTCAGTTCGACA
GCTAGAAAAACAATTGCATCCACATCAAAAAAAGACTTCAGCAAAAAACAAGTACCAACTTTTTCTCAAAGAAGAAGAAA
ACAGATTAAAAAAGATATTCGGTACAGAAATCTCACTCCAATTTTCTAAGCAATCGCAATCTGGAAAAATCTGTATTCAC
TTTTCAAGTCAAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-190)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2YCD6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.725

100

0.537