Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   I6J13_RS05135 Genome accession   NZ_CP068213
Coordinates   1055409..1056476 (-) Length   355 a.a.
NCBI ID   WP_006268109.1    Uniprot ID   F9P7H5
Organism   Streptococcus constellatus strain FDAARGOS_1156     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1050409..1061476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J13_RS05115 (I6J13_05115) - 1050986..1052440 (+) 1455 WP_006270225.1 sucrose-6-phosphate hydrolase -
  I6J13_RS05120 (I6J13_05120) - 1052421..1053386 (+) 966 WP_006270237.1 LacI family DNA-binding transcriptional regulator -
  I6J13_RS05125 (I6J13_05125) - 1053471..1054289 (-) 819 WP_006270209.1 Cof-type HAD-IIB family hydrolase -
  I6J13_RS05130 (I6J13_05130) amiF 1054475..1055398 (-) 924 WP_003070566.1 ATP-binding cassette domain-containing protein Regulator
  I6J13_RS05135 (I6J13_05135) amiE 1055409..1056476 (-) 1068 WP_006268109.1 ABC transporter ATP-binding protein Regulator
  I6J13_RS05140 (I6J13_05140) amiD 1056485..1057411 (-) 927 WP_006270263.1 oligopeptide ABC transporter permease OppC Regulator
  I6J13_RS05145 (I6J13_05145) amiC 1057411..1058907 (-) 1497 WP_006268182.1 ABC transporter permease Regulator
  I6J13_RS05150 (I6J13_05150) amiA3 1059271..1061250 (-) 1980 WP_006270242.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39582.24 Da        Isoelectric Point: 4.7899

>NTDB_id=528039 I6J13_RS05135 WP_006268109.1 1055409..1056476(-) (amiE) [Streptococcus constellatus strain FDAARGOS_1156]
MTQEKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRVAQGSINYRGQDL
TKLKSNKDWEPIRGVKIATIFQDPMTSLDPINTIGSQITEVIVKHQKKTAKEAKEMAIDYMNKVGIPDAEKRFSEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKSLQQEYQFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEDVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYSHLQGDAFALRSDYAMEIDFEEKPPQIYVSDTHWAK
TWLLHENAPKVNKPAVIDDLHEKISSKMGFAHLDA

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=528039 I6J13_RS05135 WP_006268109.1 1055409..1056476(-) (amiE) [Streptococcus constellatus strain FDAARGOS_1156]
ATGACACAAGAAAAAAATGTAATATTGACTGCCCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAAGTCTTAACCGC
CATTCGTGGTGTATCACTTGACCTCATCGAAGGTGAAGTTCTTGCTCTCGTAGGAGAGTCAGGTTCTGGTAAATCTGTTT
TAACAAAGACTTTTACTGGAATGTTAGAGGATAATGGTCGAGTAGCGCAAGGATCGATTAACTATCGTGGACAAGATTTG
ACAAAATTGAAATCCAATAAAGATTGGGAACCTATTCGTGGTGTTAAAATTGCGACTATTTTCCAAGACCCAATGACAAG
TTTAGACCCAATTAATACGATTGGTAGCCAGATTACAGAAGTTATTGTAAAACATCAAAAGAAAACGGCAAAAGAAGCGA
AGGAAATGGCTATTGACTATATGAATAAAGTCGGTATTCCTGATGCTGAAAAGCGTTTTAGTGAGTATCCTTTCCAATAT
TCAGGAGGAATGCGTCAACGGATCGTTATTGCCATTGCGCTTGCTTGTCGTCCTGATATCTTAATCTGTGATGAACCTAC
AACAGCGCTTGATGTTACCATTCAAGCACAAATCATTGATTTGTTGAAATCATTGCAACAAGAGTATCAATTCACTACTA
TTTTTATCACCCACGACCTTGGAGTGGTAGCAAGTATTGCGGATAAAGTTGCCGTTATGTATGCTGGAGAAATCGTCGAG
TATGGTACAGTAGAAGACGTCTTTTATGATCCACGTCATCCTTATACTTGGAGCTTGTTATCAAGCTTGCCACAGTTGGC
AGATGATAAAGGAGAGCTTTACTCTATTCCTGGCACACCGCCGTCTCTTTATTCACACTTGCAAGGAGATGCTTTCGCTC
TTCGTTCAGATTATGCGATGGAAATTGATTTTGAGGAAAAACCACCTCAAATCTATGTATCAGATACACATTGGGCAAAA
ACATGGTTGCTTCATGAAAATGCTCCAAAAGTGAATAAACCTGCTGTTATTGATGATTTACATGAAAAAATTAGCTCAAA
AATGGGTTTTGCTCATTTAGACGCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9P7H5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

86.402

99.437

0.859

  amiE Streptococcus thermophilus LMG 18311

84.986

99.437

0.845

  amiE Streptococcus thermophilus LMD-9

84.986

99.437

0.845

  oppD Streptococcus mutans UA159

55.65

99.718

0.555