Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   I6I49_RS13065 Genome accession   NZ_CP068206
Coordinates   2262079..2266557 (+) Length   1492 a.a.
NCBI ID   WP_201950676.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain FDAARGOS_1092     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2257079..2271557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I49_RS13035 (I6I49_13025) pilG 2257280..2257663 (+) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  I6I49_RS13040 (I6I49_13030) - 2257694..2258062 (+) 369 WP_004694491.1 response regulator -
  I6I49_RS13045 (I6I49_13035) - 2258068..2258298 (+) 231 Protein_2193 chemotaxis protein CheW -
  I6I49_RS13050 (I6I49_13040) - 2258354..2259443 (+) 1090 WP_076612069.1 IS4-like element ISAba33 family transposase -
  I6I49_RS13055 (I6I49_13045) - 2259460..2259792 (+) 333 Protein_2195 chemotaxis protein CheW -
  I6I49_RS13060 (I6I49_13050) - 2259843..2261913 (+) 2071 Protein_2196 methyl-accepting chemotaxis protein -
  I6I49_RS13065 (I6I49_13055) chpA 2262079..2266557 (+) 4479 WP_201950676.1 Hpt domain-containing protein Regulator
  I6I49_RS13070 (I6I49_13060) - 2266562..2267023 (+) 462 WP_201950678.1 hypothetical protein -
  I6I49_RS13075 (I6I49_13065) dapE 2267083..2268216 (-) 1134 WP_201950693.1 succinyl-diaminopimelate desuccinylase -
  I6I49_RS13080 (I6I49_13070) - 2268333..2268479 (-) 147 WP_010326244.1 entericidin A/B family lipoprotein -
  I6I49_RS13085 (I6I49_13075) - 2268728..2269947 (+) 1220 WP_153567214.1 IS3 family transposase -
  I6I49_RS13090 (I6I49_13080) - 2269949..2270827 (-) 879 WP_201950695.1 DUF1853 family protein -
  I6I49_RS13095 (I6I49_13085) - 2270925..2271317 (+) 393 WP_058869166.1 YbaN family protein -

Sequence


Protein


Download         Length: 1492 a.a.        Molecular weight: 166533.08 Da        Isoelectric Point: 4.3933

>NTDB_id=527989 I6I49_RS13065 WP_201950676.1 2262079..2266557(+) (chpA) [Acinetobacter johnsonii strain FDAARGOS_1092]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVISGAVPLTATVQKFAKTVFKLYQFKLYSIFKAVQEIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSNDVVTGLELIDIDVVDSEPQVAAASEQDDQVHDVLEETLAIFIEEAEDHLATIDRFLNADEAKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVADELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPDYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLEKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVIEPVAEAIVSGNT
LQPSLDLAQISQQIASDHQYQQSNTANTDFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDTAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTEKVDYPATATIKVLHNIQSLVEGTTVT
TTVSEPLVEAFVAAVEEPLSNIDRTIEAEAAAVESATAIEEPSVVDNTDVTVVEQLDTPSPVQEEAVNAVEEAASLLSIV
EETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVHNFSSNVYDP
LLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLGEWKETTHLD
GGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADF
DPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVRQTA
STLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDAEQRGAAKKSATGQIELNISRQGTDVIVSFKDDGKG
IDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESEIGFGTTFII
RVPTTVAVNDALMVKAGDQQYAIPLAQIDRIVRIAPTALDHYFHSKDDQFKIDGVSYKLRYLSEFLSNQPIPRLSNIGHS
LPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQILSTKRVTHAADHR
DFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEVTNLVRHHEI
HQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4479 bp        

>NTDB_id=527989 I6I49_RS13065 WP_201950676.1 2262079..2266557(+) (chpA) [Acinetobacter johnsonii strain FDAARGOS_1092]
ATGAAAGAAATATTAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACCC
ATCAAGAAACCTTGTTGAGCATACGTCGTCACTTCCATACCTTAAAAGGCTCTGGTCGTATGGTGGGGGCAAAGTCAGCA
GGTGAAACAGCATGGGCGGTTGAAGATACCTTAAATCGTGTGATTTCAGGGGCTGTGCCGCTCACGGCAACGGTTCAAAA
GTTTGCTAAAACGGTATTCAAACTGTATCAATTTAAACTGTATTCGATATTTAAAGCGGTGCAGGAAATTGATCTTGATC
TTCGTCCACTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCGGCGCTAGAAGAGTTGCTACAACTG
TCTAATCATCTAAATAGTAATGATGTCGTGACGGGATTAGAGTTGATCGATATCGATGTGGTTGACTCTGAGCCACAAGT
TGCAGCTGCTTCTGAACAGGATGATCAAGTGCATGATGTCCTTGAAGAAACTTTAGCGATCTTCATTGAAGAAGCGGAAG
ACCATTTAGCGACTATCGATCGGTTCTTAAATGCAGATGAAGCCAAAGTACAAGATTACAATGGTTTAATCCGTGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTCTTTAATGCCAGCTCAAAAGTCGAAAATCTATTTAA
AACCTTGGTTCAAGAAGAGATCGTTTCTACCTCGAAGGAAATCTCGTTACTCACCCAATATGCTGAATTTGTACGTGACT
ATTTACACGTGCTTGGGCGTGGTACGAACGAACAGCTTGACGTGATTTACGCCACGTTCACTACGGCTTGGGATAACTAT
GGTTTCAGTATTGAAGACGTAGCTGATGAGCTAAACCCACAAGGTATGGTCTCGAAGCTGATCGAGTTAAATATTGATCT
GCTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTGCTAAGGTTGAATATCCAGACTATATCCAGCACTTAGGTGAACAAG
CAAAACAATTGCTGGAATTCACCAATAACCGTGCTGCTCAAGGAATTCATGATTTTACTTCTGAGCTATATGCGGGTTAT
CAAGCCTTACTGGAAAAGCCAGAATTACTCAATGTAGACTATGCATATGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGACACTTTAGCTGCGGGTCAGCGTGTCATTCTGACTGAAGAAGTGCATAAAGTTCTGAATGAATTAATGG
CCTTCGTACAGCAAGATGTTGAATCGACTTCGACGACGGTAATTGAACCTGTTGCTGAGGCTATTGTTTCTGGAAATACT
TTACAACCAAGCCTTGATCTTGCGCAGATTTCGCAGCAAATTGCATCGGATCATCAGTACCAGCAATCTAATACGGCCAA
TACCGATTTTGATGATGATTTGCTTGATATCTTCTTGGAAGAAGCCGAAGAATTATTGATGGGGATGGATCAGGATCTCA
ATACTTGGTCTAAAAATGGCAATGATACCGCAGCGCTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCC
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAACGTGTGATTCGTCAGCAAAT
AGCCACAACGCCACAGTTGATCAGCATTATTCGCTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTTATTCGTACTG
AGAAGGTTGATTATCCAGCAACAGCGACCATTAAGGTACTGCATAACATTCAGAGCTTAGTTGAGGGTACGACTGTTACA
ACTACAGTATCCGAGCCTTTAGTTGAAGCGTTTGTTGCGGCAGTTGAAGAACCTTTATCTAATATAGATAGAACGATTGA
AGCTGAGGCAGCTGCGGTTGAGTCAGCAACTGCGATTGAAGAGCCGAGTGTAGTTGATAACACTGACGTTACTGTCGTTG
AACAGCTGGATACTCCGTCACCTGTCCAAGAAGAAGCAGTCAACGCTGTTGAAGAAGCAGCTAGTCTTTTATCAATTGTT
GAAGAAACCTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATGGCTTACTGAAACAGTGGACTGAACAACGTAG
TGACCGTAGTGTGTTACTACAATTGCAACGTGCTGCGCACAGCTTAAAAGGCGGCGCGCGTATGGCGGAGAATGAACCCG
TTGGTGCGATTGCTTATGAACTAGAAACCACATTTGAGCAATTTGCTGTACATAATTTCAGTTCAAACGTGTATGACCCA
TTATTGCAAACTGCATTTGAATGGTTAAAACAAGCCATCTTCAAACGTGATTTCAGTAATTATGATGGTTTGAAAAATAG
CTTAGCATCTATTGATTATGTGGATGTGATTGCGCAATTACCGACGCGTGTAACTCAAATTGATTTACTCAATGCGGTAC
CAAGTTTTGAGTTTGTGCAGGGTGATGGTACGGAGCCGCCAGCAATGCTGGGTGAGTGGAAAGAAACGACTCACTTGGAT
GGCGGTAATGAGATGATCCGTATCTCAGCTGATTTGGTTGAAAAAATGATCGACCTGTCAGGTGAAAATGCGATTAACCG
TTCGCGTATCGAGATGGACTTAGGTCAGCTCGGCAATACGTTGAACGAGATGGAGCTTGCAATTAAGCGTTTGGCGGATC
AGTTACGTCGAATGGAAGGCGAGCTTGAGAGTCAAATTATTGCGAAGCATGGTTCTGAAAACTCGCGCTACGCAGACTTT
GACCCCTTGGAAATGGACCAATATTCATCGCTAAATCAATTGTCTAAATCCTTAGCCGAATCAGCTTCGGATTTGGTCGA
CTTCAAGAGCACTTTGGCTGAGAAAATTCGTGATGCGGAAGGCTTGTTATTACAACAATCCCGTATTCAAGCGGAGATTC
AAGAAAGCTTAATGCGGACACGTTTGGTACCGTTCTCACGTATGCTGCCTCGTTTGCAACGTATTGTACGTCAGACCGCC
TCAACCTTGAACCGTCCGACAGAACTGGTCGTCCATAACACCGAAGGTGAATTGGATCGTACGATTCTTGAACGTTTGGT
TACACCGTTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATGCGGAACAACGTGGCGCTGCGAAAAAAT
CAGCGACAGGTCAAATTGAACTGAACATTAGTCGTCAAGGTACAGATGTTATCGTCAGCTTTAAAGATGATGGTAAGGGT
ATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAATTTAGGTTTAATTAAAGCCGATCAAGTACTAGATAAACAGGAAAT
TTTACAGTTTATTTTCCATCCAGGTTTTAGTACGGCCAAAGAAGTGACGCAAATTTCTGGACGTGGTGTTGGTCTTGATG
TGGTGCAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAAATTGGATTCGGCACAACCTTCATTATT
CGCGTACCGACTACGGTGGCGGTGAATGATGCCCTGATGGTGAAAGCCGGTGATCAACAATATGCGATTCCATTGGCGCA
GATTGATCGTATTGTGCGTATTGCTCCAACAGCACTGGATCACTATTTCCACAGCAAGGATGACCAATTCAAAATTGATG
GCGTGAGTTATAAGCTGCGCTATTTATCTGAGTTTTTATCCAATCAGCCGATTCCGCGTTTGAGTAATATTGGACATTCA
TTGCCAGTGCTATTGATTAAAGGCAATAGTGGACAAACCATTGCATTGTTGGTCGATCAGCTGATTGGTTCACGTGCGCA
AATTGTAGTGAAGCCAGTTGGACAACAGTTTGCTAGCATTGGTGCAATTGCTGGTGCAACGATTTTGGGTGATGGCCATG
TGTGTTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTAAGTACCAAGCGTGTGACGCATGCAGCTGATCACCGT
GACTTTGGTCGCCATCAGGATACACGTCGTTTAGTGATGATTGTGGATGACTCGGTCACGGTTCGTAAGGTCACATCGCG
CTTATTAGAGCGCCAAGGCTTTGATATTGTGACTGCTAAAGACGGTGTCGATGCGATGGAGCAGCTTGAGAGCGTTAAAC
CAGACTTGATGTTACTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTGACGAACTTGGTTCGTCACCACGAAATT
CACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCGTGAACGTGCTTTCAGCTTGGGCGTGAC
ACACTACATGGGCAAACCATTCCAAGAGGCAGAATTACTTGCCAACATTCAGCAGTTATTGGCTGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.867

100

0.621