Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6I49_RS13035 Genome accession   NZ_CP068206
Coordinates   2257280..2257663 (+) Length   127 a.a.
NCBI ID   WP_004694493.1    Uniprot ID   A0A7H8SES6
Organism   Acinetobacter johnsonii strain FDAARGOS_1092     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IScluster/Tn 2258351..2259443 2257280..2257663 flank 688


Gene organization within MGE regions


Location: 2257280..2259443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I49_RS13035 (I6I49_13025) pilG 2257280..2257663 (+) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  I6I49_RS13040 (I6I49_13030) - 2257694..2258062 (+) 369 WP_004694491.1 response regulator -
  I6I49_RS13045 (I6I49_13035) - 2258068..2258298 (+) 231 Protein_2193 chemotaxis protein CheW -
  I6I49_RS13050 (I6I49_13040) - 2258354..2259443 (+) 1090 WP_076612069.1 IS4-like element ISAba33 family transposase -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14184.23 Da        Isoelectric Point: 4.8722

>NTDB_id=527988 I6I49_RS13035 WP_004694493.1 2257280..2257663(+) (pilG) [Acinetobacter johnsonii strain FDAARGOS_1092]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFDALSKIAQANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVVMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=527988 I6I49_RS13035 WP_004694493.1 2257280..2257663(+) (pilG) [Acinetobacter johnsonii strain FDAARGOS_1092]
ATGGACGATAAATTCCAGAATCTAAAAGTAATGGTCATTGATGATTCAAAAACCATTCGTCGCACAGCTGAAACATTATT
GCAACGTGAAGGTTGTGAAGTGGTGACTGCAGTCGATGGTTTTGACGCATTGTCAAAAATTGCTCAAGCCAATCCTGATA
TCGTATTTGTCGACATTATGATGCCACGACTAGATGGTTATCAAACGTGTGCATTAATCAAAAATTCACAAAATTATCAA
AATATTCCTGTCGTAATGCTCTCTAGCAAAGATGGTCTATTTGACCAAGCCAAAGGGCGTGTTGTCGGTTCAGATGAATA
TTTAACAAAGCCGTTTAGTAAAGATGAATTATTAAATGCGATTCGTAATCACGTTTCAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SES6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

94.488

100

0.945
  vicR Streptococcus mutans UA159

39.316

92.126

0.362