Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   I6I51_RS12825 Genome accession   NZ_CP068187
Coordinates   2520355..2521509 (-) Length   384 a.a.
NCBI ID   WP_125281524.1    Uniprot ID   A0AA42MRI8
Organism   Acinetobacter johnsonii strain FDAARGOS_1094     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2515355..2526509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I51_RS12800 (I6I51_12805) - 2515705..2516250 (-) 546 WP_004984048.1 glutathione peroxidase -
  I6I51_RS12805 (I6I51_12810) - 2516374..2516928 (-) 555 WP_087013940.1 hypothetical protein -
  I6I51_RS12810 (I6I51_12815) - 2517264..2518184 (+) 921 WP_201702166.1 DMT family transporter -
  I6I51_RS12815 (I6I51_12820) - 2518584..2519153 (-) 570 WP_010325660.1 L-threonylcarbamoyladenylate synthase -
  I6I51_RS12820 (I6I51_12825) dprA 2519199..2520332 (-) 1134 WP_201702175.1 DNA-processing protein DprA Machinery gene
  I6I51_RS12825 (I6I51_12830) tsaP 2520355..2521509 (-) 1155 WP_125281524.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6I51_RS12830 (I6I51_12835) def 2521630..2522163 (+) 534 WP_201702181.1 peptide deformylase -
  I6I51_RS12835 (I6I51_12840) - 2522254..2522691 (+) 438 WP_078389804.1 DUF2946 family protein -
  I6I51_RS12840 (I6I51_12845) - 2522763..2523254 (+) 492 Protein_2449 TonB-dependent receptor plug domain-containing protein -
  I6I51_RS12845 (I6I51_12850) - 2523949..2523950 (-) 2 WP_125625403.1 IS4-like element ISAba33 family transposase -
  I6I51_RS12850 (I6I51_12855) - 2524524..2524862 (-) 339 Protein_2451 transposase family protein -
  I6I51_RS12855 (I6I51_12860) - 2524900..2525304 (-) 405 WP_008942454.1 transposase family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42294.31 Da        Isoelectric Point: 8.2072

>NTDB_id=527908 I6I51_RS12825 WP_125281524.1 2520355..2521509(-) (tsaP) [Acinetobacter johnsonii strain FDAARGOS_1094]
MKKVFMGMPSFSALGFKQHMLALAVCVSVGAGVISTAQAAPTRNYNPPALKANAPNVYVVKKGDTLWDISKRFLNNPVRW
PEIWASNRHVKNPHWIFPGDRLLMCTYEGRPIIGKDEGDGCEGIIRRYTGGTKLQPQARVESLNNAIPVIPLEYIKNWLE
HSTILSEESLKGTPYIVGAADERVIAGKGQTVYARGQGIEVGQRYAIYREGEPYIVTDAEGKKQNLGLELTQVASAIAIR
GENDMSTLEITDSYNSEVRRGYRVLPEYDAMLPTLFYPTHAQDVTGGGQVIRVQGSIGLAAKHSVVTIDRGTVDGVQSGY
VFSVSQKGQEIRDPKTNEKLTLPTERIGNIMVFKTFDRVSYAYVLDSELPMNLGAKISPSVVDE

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=527908 I6I51_RS12825 WP_125281524.1 2520355..2521509(-) (tsaP) [Acinetobacter johnsonii strain FDAARGOS_1094]
ATGAAAAAGGTTTTTATGGGCATGCCATCTTTTAGTGCCTTGGGGTTTAAGCAACACATGTTAGCACTTGCGGTTTGCGT
AAGTGTTGGCGCAGGCGTCATTTCAACAGCTCAAGCGGCGCCTACACGAAATTACAATCCACCTGCTTTAAAAGCCAATG
CACCGAATGTTTATGTGGTGAAAAAAGGCGATACCCTGTGGGATATTTCTAAACGTTTCCTAAACAATCCTGTGCGTTGG
CCTGAAATTTGGGCCAGCAATAGACACGTCAAAAATCCGCATTGGATTTTCCCAGGTGACCGTTTATTGATGTGTACCTA
TGAAGGTCGTCCAATTATTGGTAAAGATGAAGGTGATGGCTGTGAAGGAATTATTCGTCGTTATACAGGCGGCACTAAAC
TTCAACCTCAAGCACGCGTTGAGTCTTTAAACAATGCCATTCCTGTCATTCCACTGGAATACATTAAAAACTGGCTTGAA
CACAGCACTATTCTTTCAGAGGAATCTTTGAAAGGTACACCGTATATAGTGGGTGCTGCCGATGAGCGTGTGATTGCAGG
TAAAGGCCAAACCGTTTATGCACGAGGCCAAGGCATTGAAGTCGGTCAACGCTACGCAATTTACCGTGAAGGCGAACCGT
ACATTGTGACGGATGCAGAGGGCAAAAAACAAAATCTAGGTCTAGAATTGACTCAGGTTGCTTCAGCCATTGCCATTCGT
GGTGAAAATGACATGTCCACTTTAGAAATCACAGATTCGTATAATTCTGAAGTACGTCGTGGTTATCGCGTACTGCCTGA
ATACGACGCCATGCTTCCAACCTTGTTCTACCCAACACATGCACAAGATGTGACTGGGGGTGGACAAGTGATTCGTGTTC
AAGGTTCGATTGGTCTAGCGGCGAAGCATTCAGTTGTAACCATTGACCGTGGCACAGTGGATGGCGTTCAATCGGGTTAT
GTGTTCTCAGTGAGTCAAAAGGGTCAAGAAATTCGTGATCCGAAAACCAATGAAAAACTGACCCTTCCAACGGAGCGTAT
CGGCAACATCATGGTCTTTAAAACCTTTGACCGTGTCAGCTATGCCTATGTGCTCGACAGCGAACTACCAATGAACTTGG
GCGCGAAAATTTCTCCCTCTGTCGTGGATGAATAA

Domains


Predicted by InterproScan.

(58-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

66.234

100

0.664