Detailed information NTG0527879

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: I6I52_RS17130
• Genome accession: NZ_CP068180
• Coordinates: 576039..576899 (-)
• Length: 286 a.a.
• NCBI ID: WP_004991676.1
• Uniprot ID: -
• Organism: Acinetobacter ursingii strain FDAARGOS_1095
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 571039..581899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I52_RS02590 (I6I52_02590)	recN	571133..572794 (-)	1662	WP_004991683.1	DNA repair protein RecN	-
I6I52_RS02595 (I6I52_02595)	-	573302..573628 (+)	327	WP_004991681.1	pyrimidine/purine nucleoside phosphorylase	-
I6I52_RS02600 (I6I52_02600)	rlmB	573748..574497 (+)	750	WP_004991679.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
I6I52_RS02605 (I6I52_02605)	-	574538..575461 (+)	924	WP_004991678.1	DMT family transporter	-
I6I52_RS02610 (I6I52_02610)	coaE	575443..576036 (-)	594	WP_004991677.1	dephospho-CoA kinase	-
I6I52_RS17130 (I6I52_02615)	pilD	576039..576899 (-)	861	WP_004991676.1	A24 family peptidase	Machinery gene
I6I52_RS02620 (I6I52_02620)	pilC	576899..578125 (-)	1227	WP_004991675.1	type II secretion system F family protein	Machinery gene
I6I52_RS02625 (I6I52_02625)	pilB	578156..579877 (-)	1722	WP_004991672.1	type IV-A pilus assembly ATPase PilB	Machinery gene
I6I52_RS02630 (I6I52_02630)	tpiA	580228..581025 (+)	798	WP_004991671.1	triose-phosphate isomerase	-
I6I52_RS02635 (I6I52_02635)	secG	581035..581364 (+)	330	WP_004991669.1	preprotein translocase subunit SecG	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32133.59 Da
• Isoelectric Point: 7.8325

>NTDB_id=527879 I6I52_RS17130 WP_004991676.1 576039..576899(-) (pilD) [Acinetobacter ursingii strain FDAARGOS_1095]
MSEILNYFIQTPTALYLAVGIFSLCIGSFLNVVIYRTPKMMEQDWHTECQMLLHPDQAIIDQDKLTLSSPPSTCPKCHSR
IRWYQNIPLLSWLFLKGKCGHCQNPISIRYPLIELLTMLCSLMIVAVFGPSFQMLFGLVLTWVLIALTFIDFDTQLLPDR
FTLPLAALGLGVNSYSLYVSPTAAIWGYLIGFLCLWIVYYLFKIITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
VGAIIGIILLKIRKENQPFAFGPYIAIAGWIAFLWGEQIMKVYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=527879 I6I52_RS17130 WP_004991676.1 576039..576899(-) (pilD) [Acinetobacter ursingii strain FDAARGOS_1095]
ATGTCCGAAATTCTTAATTATTTTATCCAAACCCCAACTGCGCTTTATCTTGCAGTTGGGATTTTTAGCTTGTGCATTGG
TAGTTTTTTAAATGTTGTGATTTATCGCACGCCAAAAATGATGGAACAGGACTGGCACACTGAGTGCCAGATGTTGTTAC
ATCCTGATCAAGCGATCATTGATCAAGATAAACTGACATTAAGTTCACCACCTTCAACCTGCCCCAAATGCCATAGCCGT
ATTCGTTGGTATCAAAATATTCCATTGCTCAGTTGGCTATTTTTAAAAGGTAAATGTGGCCATTGTCAAAATCCGATTAG
CATCCGTTATCCTTTGATTGAACTGCTCACGATGCTATGTTCACTGATGATCGTGGCTGTCTTTGGCCCGAGCTTTCAAA
TGCTGTTTGGTCTGGTTTTAACTTGGGTGCTTATTGCCCTCACGTTTATTGATTTTGATACTCAACTGTTGCCCGATCGT
TTTACTCTGCCGCTAGCAGCATTAGGTCTAGGGGTTAATAGCTATAGTCTTTATGTCTCACCAACCGCCGCGATTTGGGG
CTATCTGATTGGTTTTTTATGCCTGTGGATTGTCTATTATTTATTTAAAATCATTACAGGTAAAGAAGGGATGGGCTATG
GCGATTTTAAGTTACTTGCTGCTCTCGGCGCATGGATGGGACCTTTGATGCTTCCACTGATTGTGCTACTTTCTTCACTG
GTCGGTGCGATTATAGGGATTATTTTACTCAAAATTCGTAAAGAAAATCAGCCATTTGCCTTTGGCCCTTATATCGCCAT
TGCTGGATGGATCGCCTTTTTATGGGGTGAGCAAATTATGAAAGTTTATCTGGGAGGCTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	82.517	100	0.825
pilD	Acinetobacter baumannii D1279779	81.469	100	0.815
pilD	Vibrio cholerae strain A1552	55.056	93.357	0.514
pilD	Vibrio campbellii strain DS40M4	51.228	99.65	0.51
pilD	Neisseria gonorrhoeae MS11	45.421	95.455	0.434