Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   I6I52_RS15725 Genome accession   NZ_CP068180
Coordinates   3367934..3369085 (+) Length   383 a.a.
NCBI ID   WP_004985575.1    Uniprot ID   A0A3G9FM33
Organism   Acinetobacter ursingii strain FDAARGOS_1095     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3362934..3374085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I52_RS15700 (I6I52_15700) - 3363075..3364280 (+) 1206 WP_004985562.1 oxygenase MpaB family protein -
  I6I52_RS15705 (I6I52_15705) - 3364326..3364583 (-) 258 WP_004985566.1 hypothetical protein -
  I6I52_RS15710 (I6I52_15710) - 3364627..3366669 (-) 2043 WP_004985567.1 TonB-dependent copper receptor -
  I6I52_RS15715 (I6I52_15715) - 3366771..3367202 (-) 432 WP_370685012.1 DUF2946 family protein -
  I6I52_RS15720 (I6I52_15720) def 3367288..3367812 (-) 525 WP_004985572.1 peptide deformylase -
  I6I52_RS15725 (I6I52_15725) tsaP 3367934..3369085 (+) 1152 WP_004985575.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6I52_RS15730 (I6I52_15730) dprA 3369097..3370227 (+) 1131 WP_004985578.1 DNA-processing protein DprA Machinery gene
  I6I52_RS15735 (I6I52_15735) - 3370270..3370842 (+) 573 WP_004985579.1 L-threonylcarbamoyladenylate synthase -
  I6I52_RS15740 (I6I52_15740) - 3371336..3372253 (-) 918 WP_004985582.1 ABC transporter permease -
  I6I52_RS15745 (I6I52_15745) - 3372263..3373369 (-) 1107 WP_004985584.1 ABC transporter permease -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 42210.40 Da        Isoelectric Point: 9.1290

>NTDB_id=527875 I6I52_RS15725 WP_004985575.1 3367934..3369085(+) (tsaP) [Acinetobacter ursingii strain FDAARGOS_1095]
MKKVLHGIRSFNALGLKKHCIAVAICAGLGMTGLSATYAASPNVNPPSLRASAPNVYVVKKGDTLWDISGKFLDKPWRWP
EIWASNKHVKNPHWIYPGDRLLLCTLDGRPLVGRDEGDGCEGIIRRYSGRTTLQPQVRIEQLSNTIPVIPLDNIKQWLDR
TAIVASDSIENTPYILGTADQRVLAGKGQNVYVRGQGLTSGQRYAVYRKGEPYVLTDANGKKHTVGLELLQVASGIVTQV
DHDIATMELTDSYNAEVRRGDLVMFEQEAMLPTLFYPTEANQVTQGGQIIRVMGSIGSAAKNSVVTIDRGRLDGVQSGHV
FAIYQQGETVQDPKTKERIKLPNQKVGTLMVFRTFDQLSYAYVLESSLPIKVGAEILPPRLDD

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=527875 I6I52_RS15725 WP_004985575.1 3367934..3369085(+) (tsaP) [Acinetobacter ursingii strain FDAARGOS_1095]
ATGAAAAAGGTTTTGCACGGCATTCGATCATTTAATGCCTTGGGGTTGAAAAAACATTGTATCGCTGTGGCGATTTGCGC
TGGACTCGGGATGACGGGACTCAGTGCAACCTACGCAGCAAGTCCAAACGTGAATCCACCTTCACTCAGAGCAAGCGCAC
CAAATGTTTATGTCGTTAAAAAAGGCGATACATTGTGGGATATTTCAGGAAAATTTCTGGATAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAGCAATAAACACGTTAAGAACCCGCACTGGATTTATCCCGGTGATCGCTTGTTGTTATGTACGCTAGA
TGGACGTCCACTGGTAGGCCGTGACGAAGGTGATGGTTGTGAAGGTATTATCCGTCGTTATTCGGGACGAACCACGCTAC
AGCCTCAAGTTCGTATTGAACAACTCAGTAATACGATTCCTGTGATTCCACTGGACAATATCAAACAATGGTTAGATCGT
ACCGCCATTGTCGCGAGTGACAGTATCGAAAATACACCTTATATTTTAGGGACAGCAGATCAGCGTGTACTGGCAGGTAA
AGGGCAAAATGTTTATGTACGCGGTCAGGGCCTAACTTCGGGTCAACGCTATGCGGTCTATCGTAAAGGCGAACCTTATG
TGCTGACAGATGCAAATGGCAAAAAACACACCGTGGGCTTGGAATTACTGCAAGTCGCTTCAGGTATTGTGACTCAAGTC
GACCATGATATTGCCACCATGGAACTGACCGATAGCTACAATGCTGAAGTTCGTCGTGGTGATCTGGTCATGTTTGAACA
AGAAGCCATGTTACCAACTTTGTTCTATCCAACAGAAGCCAATCAGGTGACTCAAGGTGGACAGATCATTCGGGTAATGG
GTTCAATCGGTTCTGCTGCTAAAAATAGTGTAGTCACCATTGATCGTGGTCGTCTGGATGGTGTGCAATCAGGTCATGTT
TTTGCAATTTATCAACAAGGTGAAACGGTTCAGGACCCTAAAACCAAAGAAAGAATCAAATTACCAAATCAGAAAGTCGG
AACCTTGATGGTATTTAGAACTTTTGACCAACTAAGCTATGCCTATGTGTTAGAAAGTTCCCTACCGATTAAAGTGGGTG
CTGAGATTTTGCCTCCCCGTCTTGACGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3G9FM33

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

70.833

100

0.71