Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   I6I53_RS05930 Genome accession   NZ_CP068176
Coordinates   1147675..1148826 (-) Length   383 a.a.
NCBI ID   WP_004995419.1    Uniprot ID   A0A7T9UK16
Organism   Acinetobacter ursingii strain FDAARGOS_1096     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1142675..1153826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I53_RS05910 (I6I53_05915) - 1143392..1144498 (+) 1107 WP_004995428.1 ABC transporter permease -
  I6I53_RS05915 (I6I53_05920) - 1144508..1145425 (+) 918 WP_004995427.1 ABC transporter permease -
  I6I53_RS05920 (I6I53_05925) - 1145918..1146490 (-) 573 WP_004995425.1 L-threonylcarbamoyladenylate synthase -
  I6I53_RS05925 (I6I53_05930) dprA 1146533..1147663 (-) 1131 WP_004995422.1 DNA-processing protein DprA Machinery gene
  I6I53_RS05930 (I6I53_05935) tsaP 1147675..1148826 (-) 1152 WP_004995419.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6I53_RS05935 (I6I53_05940) def 1148948..1149472 (+) 525 WP_004985572.1 peptide deformylase -
  I6I53_RS05940 (I6I53_05945) - 1149558..1149989 (+) 432 WP_373866500.1 DUF2946 family protein -
  I6I53_RS05945 (I6I53_05950) - 1150091..1152133 (+) 2043 WP_004995413.1 TonB-dependent copper receptor -
  I6I53_RS05950 (I6I53_05955) - 1152177..1152434 (+) 258 WP_004985566.1 hypothetical protein -
  I6I53_RS05955 (I6I53_05960) - 1152480..1153685 (-) 1206 WP_004995412.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 42194.40 Da        Isoelectric Point: 9.1290

>NTDB_id=527819 I6I53_RS05930 WP_004995419.1 1147675..1148826(-) (tsaP) [Acinetobacter ursingii strain FDAARGOS_1096]
MKKVLHGIRSFNALGLKKHCIAVAICAGLGMTGLSAIYAASPNVNPPSLRASAPNVYVVKKGDTLWDISGKFLDKPWRWP
EIWASNKHVKNPHWIYPGDRLLLCTLDGRPLVGRDEGDGCEGIIRRYSGRTTLQPQVRIEQLSNTIPVIPLDNIKQWLDR
TAIVASDSIENTPYILGTADQRVLAGKGQNVYVRGQGLTSGQRYAVYRKGEPYVLTDANGKKHTVGLELLQVASGIVTQV
DHDIATMELTDSYNAEVRRGDLVMFEQEAMLPTLFYPTEANQVTQGGQIVRVMGSIGSAAKNSVVTIDRGRLDGVQSGHV
FAIYQQGETVQDPKTKERVKLPNQKVGTLMVFRTFDQLSYAYVLESSLPIKVGAEILPPRLDD

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=527819 I6I53_RS05930 WP_004995419.1 1147675..1148826(-) (tsaP) [Acinetobacter ursingii strain FDAARGOS_1096]
ATGAAAAAGGTTTTGCACGGCATTCGATCATTTAATGCCTTGGGGTTGAAAAAACATTGTATCGCTGTGGCGATTTGCGC
TGGACTCGGGATGACGGGACTCAGTGCAATCTATGCAGCAAGTCCAAACGTGAATCCACCTTCACTCAGAGCAAGCGCAC
CAAATGTTTATGTCGTTAAAAAAGGCGATACATTGTGGGATATTTCAGGAAAATTTCTGGATAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAGCAATAAACACGTTAAAAATCCGCACTGGATTTATCCGGGTGATCGCTTATTGTTATGTACGCTAGA
TGGACGTCCACTGGTAGGCCGTGACGAAGGTGATGGTTGTGAAGGTATTATCCGTCGTTATTCGGGACGAACTACTCTAC
AGCCTCAAGTTCGTATTGAACAACTCAGTAATACGATTCCTGTGATTCCACTGGACAATATCAAACAATGGTTAGATCGT
ACCGCCATTGTCGCGAGTGACAGTATCGAAAATACGCCTTATATTTTAGGGACAGCAGATCAGCGTGTACTGGCAGGTAA
AGGGCAAAATGTTTACGTACGCGGTCAGGGTCTAACTTCGGGTCAACGCTATGCGGTCTATCGTAAAGGCGAACCTTATG
TGCTGACGGATGCAAATGGCAAAAAACACACCGTGGGCTTGGAATTACTACAAGTCGCTTCAGGTATTGTGACTCAAGTC
GACCATGATATTGCCACCATGGAATTGACCGATAGCTATAATGCCGAAGTTCGTCGTGGTGATCTGGTCATGTTTGAACA
AGAAGCCATGTTACCAACTTTGTTCTATCCAACAGAAGCCAATCAGGTAACTCAAGGTGGACAAATCGTTCGGGTAATGG
GTTCAATCGGTTCTGCTGCTAAAAATAGTGTAGTCACCATTGATCGTGGTCGTCTGGATGGTGTGCAATCAGGTCATGTT
TTTGCAATTTATCAACAAGGTGAAACGGTTCAAGACCCTAAAACTAAAGAAAGAGTCAAATTGCCAAATCAGAAAGTCGG
AACCTTGATGGTATTTAGAACTTTTGACCAACTAAGCTATGCCTATGTGTTAGAAAGTTCCCTACCAATTAAAGTGGGTG
CTGAGATTTTGCCTCCCCGTCTTGACGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

70.312

100

0.705