Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   I6I58_RS07165 Genome accession   NZ_CP068172
Coordinates   1370692..1371345 (-) Length   217 a.a.
NCBI ID   WP_074691852.1    Uniprot ID   -
Organism   Campylobacter lari strain FDAARGOS_1101     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1365692..1376345
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I58_RS07140 (I6I58_07140) - 1366261..1366491 (+) 231 WP_012661646.1 hypothetical protein -
  I6I58_RS07145 (I6I58_07145) - 1366488..1367117 (+) 630 WP_012661645.1 hypothetical protein -
  I6I58_RS07960 - 1367106..1367237 (-) 132 WP_255197728.1 hypothetical protein -
  I6I58_RS07150 (I6I58_07150) - 1367480..1368262 (+) 783 WP_012661644.1 HrcA family transcriptional regulator -
  I6I58_RS07155 (I6I58_07155) grpE 1368259..1368768 (+) 510 WP_074691845.1 nucleotide exchange factor GrpE -
  I6I58_RS07160 (I6I58_07160) dnaK 1368790..1370658 (+) 1869 WP_074691849.1 molecular chaperone DnaK -
  I6I58_RS07165 (I6I58_07165) CJE0566 1370692..1371345 (-) 654 WP_074691852.1 DNA/RNA non-specific endonuclease Regulator
  I6I58_RS07170 (I6I58_07170) - 1371342..1371785 (-) 444 WP_012661640.1 GatB/YqeY domain-containing protein -
  I6I58_RS07175 (I6I58_07175) - 1371796..1372761 (-) 966 WP_074691855.1 exopolyphosphatase -
  I6I58_RS07180 (I6I58_07180) - 1372817..1373584 (+) 768 WP_012661638.1 pyridoxine 5'-phosphate synthase -
  I6I58_RS07185 (I6I58_07185) pdxA 1373581..1374681 (+) 1101 WP_012661637.1 4-hydroxythreonine-4-phosphate dehydrogenase -
  I6I58_RS07190 (I6I58_07190) - 1374728..1376248 (+) 1521 WP_012661636.1 inorganic phosphate transporter -

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 26047.08 Da        Isoelectric Point: 9.7936

>NTDB_id=527785 I6I58_RS07165 WP_074691852.1 1370692..1371345(-) (CJE0566) [Campylobacter lari strain FDAARGOS_1101]
MKKALILCTLALSSFAYTQYELDPSFKKYFQNCSLLMDKYYYINCYDYNYKGTKAIAYKLEARILNQKHIKKRPKFKDDT
NIPKKYRTYWEDYIKSGYTRGHVVPNQSMNTTPQAQLSTFLMSNITPQKKDINAKIWNEIEQRERYLAKKYKELEVLNLV
LYDDKPKRIKNNIAIPSFYVKILKAKNYSECYKVPNNDNFAEFDKNYFKEDCKKYID

Nucleotide


Download         Length: 654 bp        

>NTDB_id=527785 I6I58_RS07165 WP_074691852.1 1370692..1371345(-) (CJE0566) [Campylobacter lari strain FDAARGOS_1101]
ATGAAAAAAGCCTTAATTCTTTGCACTCTAGCCTTAAGCTCTTTTGCATACACTCAATATGAGCTTGATCCTAGCTTTAA
AAAGTATTTTCAAAATTGCTCTTTATTGATGGATAAGTATTATTATATTAATTGTTATGATTATAACTATAAAGGCACTA
AAGCAATAGCTTATAAACTTGAAGCTAGAATTTTAAATCAAAAACACATTAAAAAACGCCCAAAATTTAAAGATGATACT
AACATTCCTAAAAAATATAGAACTTATTGGGAAGATTATATAAAAAGTGGTTATACAAGAGGGCATGTCGTGCCAAATCA
ATCCATGAATACAACCCCACAAGCCCAACTTAGCACTTTTTTAATGAGCAATATAACCCCGCAAAAAAAAGATATCAATG
CAAAAATTTGGAATGAAATCGAACAAAGAGAAAGATATCTTGCAAAAAAATACAAAGAATTAGAAGTGCTAAATTTAGTG
CTTTATGATGATAAGCCAAAACGCATTAAAAATAATATCGCCATTCCTAGTTTTTATGTAAAAATTTTAAAAGCTAAAAA
TTATAGTGAATGTTATAAAGTGCCAAATAATGATAATTTTGCAGAATTTGATAAAAATTATTTTAAAGAAGATTGTAAGA
AATATATTGATTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(36-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

59.908

100

0.599
  CJE1441 Campylobacter jejuni RM1221

64.179

92.627

0.594