Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   K7B13_RS08015 Genome accession   NZ_CP082278
Coordinates   1579082..1580350 (+) Length   422 a.a.
NCBI ID   WP_088612811.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain 35M     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1574082..1585350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7B13_RS07990 (K7B13_07990) pyrH 1574877..1575599 (+) 723 WP_003154213.1 UMP kinase -
  K7B13_RS07995 (K7B13_07995) frr 1575602..1576159 (+) 558 WP_013352283.1 ribosome recycling factor -
  K7B13_RS08000 (K7B13_08000) - 1576285..1577067 (+) 783 WP_013352284.1 isoprenyl transferase -
  K7B13_RS08005 (K7B13_08005) - 1577071..1577868 (+) 798 WP_155759167.1 phosphatidate cytidylyltransferase -
  K7B13_RS08010 (K7B13_08010) dxr 1577924..1579075 (+) 1152 WP_222891156.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  K7B13_RS08015 (K7B13_08015) eeP 1579082..1580350 (+) 1269 WP_088612811.1 RIP metalloprotease RseP Regulator
  K7B13_RS08020 (K7B13_08020) - 1580383..1582077 (+) 1695 WP_212101380.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46562.35 Da        Isoelectric Point: 6.1728

>NTDB_id=527726 K7B13_RS08015 WP_088612811.1 1579082..1580350(+) (eeP) [Bacillus amyloliquefaciens strain 35M]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIVEVETADLEHEMKITGYEQGKEDELSGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWQRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKDNPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGAFAAIAYGATSTVDVTKAILTNLSKIVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=527726 K7B13_RS08015 WP_088612811.1 1579082..1580350(+) (eeP) [Bacillus amyloliquefaciens strain 35M]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTGGGGCATTTACTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGGTTCGGACCCAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGGCTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGATCCGGAAATGATTGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGACGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATACCC
CGACGCTTTAATTGTCGAGGTGGAGACGGCTGACCTTGAGCACGAAATGAAGATTACAGGGTATGAGCAGGGGAAAGAAG
ATGAACTGTCGGGCTTTACTGTCAGTCAGACCTCTTTTTTCATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAC
CGCCAATTCGGGTCAAAACCTGTATGGCAGCGGATTAAGGCGATTGCTGCCGGTCCGATTATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTTGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGAAAACTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGCGGTCATGGACTGACATC
GTGACAGCGGTAAAAGACAATCCCGGGAAAAAAATCGATGTCGCCGTGAAACGTGACGGCAAATCGTTTCATATCTCGGT
TACCCCTGAAGCCGTAAAAGATGAAAACAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGT
TTGCTGCGATCGCTTACGGCGCGACTTCTACGGTTGATGTCACAAAGGCGATCCTGACCAATCTGAGCAAAATCGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGCCCTGTCGGAATTTATGATATGACGGATCAGGTTGCAAAAACCGGCATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTTGGAATCGTCAACCTGCTGCCGATCCCGGCGCTTGACGGCG
GAAGACTGCTGTTTTTATTCATTGAAGCAATCCGCGGTAAGCCGATTAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTCGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

38.673

100

0.4
  eeP Streptococcus thermophilus LMG 18311

38.799

100

0.398