Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | I6I40_RS05395 | Genome accession | NZ_CP068136 |
| Coordinates | 1156258..1156653 (+) | Length | 131 a.a. |
| NCBI ID | WP_001829977.1 | Uniprot ID | A0A4Q9W3V8 |
| Organism | Staphylococcus epidermidis strain FDAARGOS_1083 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1151258..1161653
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I40_RS05370 (I6I40_05370) | - | 1152677..1153081 (+) | 405 | WP_001829924.1 | F0F1 ATP synthase subunit epsilon | - |
| I6I40_RS05375 (I6I40_05375) | - | 1153230..1153463 (+) | 234 | WP_002456242.1 | DUF1146 family protein | - |
| I6I40_RS05380 (I6I40_05380) | murA | 1153573..1154838 (+) | 1266 | WP_001829978.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| I6I40_RS05385 (I6I40_05385) | fabZ | 1154872..1155309 (+) | 438 | WP_077755958.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| I6I40_RS05390 (I6I40_05390) | - | 1155627..1156067 (-) | 441 | WP_001829935.1 | YwpF-like family protein | - |
| I6I40_RS05395 (I6I40_05395) | ssb | 1156258..1156653 (+) | 396 | WP_001829977.1 | single-stranded DNA-binding protein | Machinery gene |
| I6I40_RS05400 (I6I40_05400) | - | 1157041..1157700 (+) | 660 | WP_001829904.1 | transglycosylase family protein | - |
| I6I40_RS05405 (I6I40_05405) | tenA | 1157984..1158673 (+) | 690 | WP_001829894.1 | thiaminase II | - |
| I6I40_RS05410 (I6I40_05410) | thiD | 1158666..1159487 (+) | 822 | WP_001832736.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| I6I40_RS05415 (I6I40_05415) | thiM | 1159480..1160268 (+) | 789 | WP_001829971.1 | hydroxyethylthiazole kinase | - |
| I6I40_RS05420 (I6I40_05420) | thiE | 1160274..1160912 (+) | 639 | WP_002505076.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15158.08 Da Isoelectric Point: 5.2661
>NTDB_id=527435 I6I40_RS05395 WP_001829977.1 1156258..1156653(+) (ssb) [Staphylococcus epidermidis strain FDAARGOS_1083]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDINEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDINEISTDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=527435 I6I40_RS05395 WP_001829977.1 1156258..1156653(+) (ssb) [Staphylococcus epidermidis strain FDAARGOS_1083]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATATTAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATCTATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATATTAATGAAATTTCTACAGATTATTTACTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGACAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATAAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |