Detailed information NTG0527400

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: K6969_RS12240
• Genome accession: NZ_CP082205
• Coordinates: 2543465..2544559 (+)
• Length: 364 a.a.
• NCBI ID: WP_044687286.1
• Uniprot ID: -
• Organism: Streptococcus suis strain AKJ18
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2538465..2549559

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6969_RS12215 (K6969_12085)	pgsA	2538984..2539523 (-)	540	WP_024379547.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
K6969_RS12220 (K6969_12090)	rodZ	2539533..2540390 (-)	858	WP_053863641.1	cytoskeleton protein RodZ	-
K6969_RS12225 (K6969_12095)	yfmH	2540472..2541755 (-)	1284	WP_029174211.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
K6969_RS12230 (K6969_12100)	yfmF	2541752..2543005 (-)	1254	WP_029179667.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
K6969_RS12235 (K6969_12105)	yaaA	2543079..2543462 (+)	384	WP_024375815.1	S4 domain-containing protein YaaA	-
K6969_RS12240 (K6969_12110)	recF	2543465..2544559 (+)	1095	WP_044687286.1	DNA replication/repair protein RecF	Machinery gene
K6969_RS12245 (K6969_12115)	-	2544698..2545987 (+)	1290	WP_321537425.1	IS4 family transposase	-
K6969_RS12250 (K6969_12120)	guaB	2546145..2547626 (-)	1482	WP_171943258.1	IMP dehydrogenase	-
K6969_RS12420	-	2547849..2547920 (+)	72	Protein_2390	helix-turn-helix domain-containing protein	-
K6969_RS12255 (K6969_12125)	-	2548139..2548997 (+)	859	Protein_2391	IS630 family transposase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42245.35 Da
• Isoelectric Point: 7.0557

>NTDB_id=527400 K6969_RS12240 WP_044687286.1 2543465..2544559(+) (recF) [Streptococcus suis strain AKJ18]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYKTSIELTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDNLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=527400 K6969_RS12240 WP_044687286.1 2543465..2544559(+) (recF) [Streptococcus suis strain AKJ18]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTAGGGCAAATCAAACCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTTGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACAAAACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACA
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATTG
AGCTGATGAAGGAGGTCACACGAGAATACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAATTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.083	99.176	0.695
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442