Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   I6I41_RS00575 Genome accession   NZ_CP068135
Coordinates   93946..94740 (+) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus cereus strain FDAARGOS_1084     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 88946..99740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I41_RS00560 (I6I41_00560) argR 89785..90234 (+) 450 WP_001032580.1 arginine repressor ArgR -
  I6I41_RS00565 (I6I41_00565) recN 90499..92238 (+) 1740 WP_000947767.1 DNA repair protein RecN Machinery gene
  I6I41_RS00570 (I6I41_00570) spoIVB 92357..93655 (+) 1299 WP_046392988.1 SpoIVB peptidase -
  I6I41_RS00575 (I6I41_00575) spo0A 93946..94740 (+) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  I6I41_RS00580 (I6I41_00580) - 94887..95867 (+) 981 WP_201972780.1 tyrosine-type recombinase/integrase -
  I6I41_RS00585 (I6I41_00585) - 95994..96749 (+) 756 WP_236603134.1 hypothetical protein -
  I6I41_RS00590 (I6I41_00590) - 96874..97521 (+) 648 WP_201972781.1 hypothetical protein -
  I6I41_RS00595 (I6I41_00595) - 97587..98450 (+) 864 WP_201972782.1 hypothetical protein -
  I6I41_RS00600 (I6I41_00600) - 98606..98995 (+) 390 WP_201972783.1 HNH endonuclease -
  I6I41_RS00605 (I6I41_00605) - 99013..99540 (+) 528 WP_201972784.1 P27 family phage terminase small subunit -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=527377 I6I41_RS00575 WP_011110369.1 93946..94740(+) (spo0A) [Bacillus cereus strain FDAARGOS_1084]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=527377 I6I41_RS00575 WP_011110369.1 93946..94740(+) (spo0A) [Bacillus cereus strain FDAARGOS_1084]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818