Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   I6I77_RS09540 Genome accession   NZ_CP068132
Coordinates   1895043..1896311 (+) Length   422 a.a.
NCBI ID   WP_060792267.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain FDAARGOS_1120     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1890043..1901311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I77_RS09515 (I6I77_09505) tsf 1890788..1891669 (+) 882 WP_005229432.1 translation elongation factor Ts -
  I6I77_RS09520 (I6I77_09510) pyrH 1891817..1892539 (+) 723 WP_005229433.1 UMP kinase -
  I6I77_RS09525 (I6I77_09515) frr 1892541..1893098 (+) 558 WP_005229434.1 ribosome recycling factor -
  I6I77_RS09530 (I6I77_09520) - 1893290..1894090 (+) 801 WP_015510051.1 isoprenyl transferase -
  I6I77_RS09535 (I6I77_09525) - 1894087..1894893 (+) 807 WP_010749318.1 phosphatidate cytidylyltransferase -
  I6I77_RS09540 (I6I77_09530) eeP 1895043..1896311 (+) 1269 WP_060792267.1 RIP metalloprotease RseP Regulator
  I6I77_RS09545 (I6I77_09535) - 1896381..1898090 (+) 1710 WP_005229438.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45445.74 Da        Isoelectric Point: 4.4845

>NTDB_id=527356 I6I77_RS09540 WP_060792267.1 1895043..1896311(+) (eeP) [Enterococcus casseliflavus strain FDAARGOS_1120]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAMTYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATIVTGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPDTQIALAVKRGSETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGLRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=527356 I6I77_RS09540 WP_060792267.1 1895043..1896311(+) (eeP) [Enterococcus casseliflavus strain FDAARGOS_1120]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTAGTGGTAGTGATTCACGAGTTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTTCCATTAGGCGGGTATGTCCAAATGGCGGGCTGGGGTGAAGATGAAACAGAATTAACACCA
GGTATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTTATCAAAATCAATACGAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCTATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACAGGGTTCATCAATGGCAATGAACAAG
AAGCGATGACGTACGCTGTGGATCATGATGCAACGATCATCCATGAAGATGGCGTTGAAGTTCGGATCGCACCTAAAGAC
GTTCAATTCCAGTCCGCAAAGCTTTGGCAGCGAATGCTGACGAATTTTGCTGGACCGATGAACAACTTTATTTTATCCTT
GGTCTTATTCACTGGGTTGGTGTTTGCACAAGGTGGTGTTGCGAATCAAGATGCAACCATCGTGACAGGAATCGAAGCAG
GAACACCGGCAGCTGAAGCAGGGCTGCAAAATGGCGATGAAATCTTAGCTGTCGAAGGTGTCGATGTTTCTAACTGGTCA
GAATTAACGACTGAGATCCAAAAGTACCCGGATACTCAGATTGCTCTAGCAGTCAAACGAGGATCAGAAACACTTGATTT
GACGGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATTGGTTTCTTAGGGATCACCGCTTCCTTAAAAACTGGGA
TCGGAGATATCTTACTGGGCGGCTTGCAAACGACCATTGACAATTCACTGGTGATTTTTAGAGCAGTCGGCAACTTGATT
GCCCAACCAGATATCAATAAATTGGGTGGACCGGTAGCGATTTTCCAACTGTCTTCTCAAGCTGCATCGCAAGGGGTAAC
AACGGTGATCGCGATGATGGCGATGATTTCTATCAACTTGGGGATCTTTAATTTATTACCGATTCCTGGATTGGATGGCG
GTAAGCTGGTTTTAAATATTTTAGAAGGTTTGCGAGGCAAGCCAATCAGCCAAGAAAAAGAAGGCATCATTACTCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-408)

PDZ domain (PDZ_6)

(207-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

52.225

100

0.528
  eeP Streptococcus thermophilus LMG 18311

51.288

100

0.519