Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   I6I78_RS12335 Genome accession   NZ_CP068128
Coordinates   2655264..2656532 (-) Length   422 a.a.
NCBI ID   WP_195961141.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain FDAARGOS_1121     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2650264..2661532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I78_RS12330 (I6I78_12330) - 2653485..2655194 (-) 1710 WP_156236099.1 proline--tRNA ligase -
  I6I78_RS12335 (I6I78_12335) eeP 2655264..2656532 (-) 1269 WP_195961141.1 RIP metalloprotease RseP Regulator
  I6I78_RS12340 (I6I78_12340) - 2656683..2657489 (-) 807 WP_077452615.1 phosphatidate cytidylyltransferase -
  I6I78_RS12345 (I6I78_12345) - 2657486..2658286 (-) 801 WP_086293422.1 isoprenyl transferase -
  I6I78_RS12350 (I6I78_12350) frr 2658478..2659035 (-) 558 WP_201705152.1 ribosome recycling factor -
  I6I78_RS12355 (I6I78_12355) pyrH 2659037..2659759 (-) 723 WP_005229433.1 UMP kinase -
  I6I78_RS12360 (I6I78_12360) tsf 2659907..2660788 (-) 882 WP_005229432.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45526.84 Da        Isoelectric Point: 4.4845

>NTDB_id=527327 I6I78_RS12335 WP_195961141.1 2655264..2656532(-) (eeP) [Enterococcus casseliflavus strain FDAARGOS_1121]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAITYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATIVTGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPDTQINLIIKRGSETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGLRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=527327 I6I78_RS12335 WP_195961141.1 2655264..2656532(-) (eeP) [Enterococcus casseliflavus strain FDAARGOS_1121]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTGGTGGTAGTGATTCACGAATTCGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTGCCATTAGGCGGGTATGTCCAAATGGCGGGCTGGGGTGAAGATGAAACAGAATTAACACCA
GGTATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTTATCAAAATCAATACGAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCTATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACAGGGTTCATCAATGGCAATGAACAAG
AAGCGATTACGTACGCTGTGGATCATGATGCAACGATCATCCATGAAGATGGCGTTGAAGTTCGGATCGCACCTAAAGAC
GTTCAATTCCAGTCCGCAAAGCTTTGGCAGCGAATGCTGACGAATTTTGCTGGACCGATGAACAACTTTATTTTATCCTT
GGTCTTATTCACTGGGTTGGTGTTTGCACAAGGTGGTGTTGCGAATCAAGATGCAACCATCGTGACAGGAATCGAAGCAG
GAACACCGGCAGCTGAAGCAGGGCTGCAAAATGGCGATGAAATCTTAGCTGTCGAAGGTGTCGATGTTTCTAACTGGTCA
GAATTAACGACTGAGATCCAAAAGTACCCAGATACTCAGATTAATCTAATAATCAAACGAGGATCAGAAACACTTGATTT
GACGGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATTGGTTTCTTAGGGATCACCGCTTCCTTAAAAACTGGGA
TCGGAGATATCTTACTGGGTGGCTTGCAAACGACCATTGACAATTCACTGGTGATTTTTAGAGCAGTCGGCAACTTGATT
GCCCAACCAGATATCAATAAATTGGGTGGACCGGTAGCGATTTTCCAACTGTCTTCTCAAGCTGCATCGCAAGGGGTAAC
AACGGTGATCGCGATGATGGCGATGATTTCCATCAACTTGGGGATCTTTAATTTATTACCGATTCCTGGATTGGATGGCG
GTAAGCTGGTTTTAAATATTTTAGAAGGTTTGCGAGGCAAGCCTATCAGCCAAGAAAAAGAAGGCATCATTACCCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATCCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(207-260)

Peptidase family M50 (Peptidase_M50)

(7-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

51.991

100

0.526
  eeP Streptococcus thermophilus LMG 18311

51.054

100

0.517