Detailed information NTG0527299

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: K6974_RS13145
• Genome accession: NZ_CP082204
• Coordinates: 2610180..2611274 (+)
• Length: 364 a.a.
• NCBI ID: WP_222337442.1
• Uniprot ID: -
• Organism: Streptococcus suis strain FJSM5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2605180..2616274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6974_RS13105 (K6974_12970)	-	2605337..2605549 (-)	213	WP_222337434.1	hypothetical protein	-
K6974_RS13110 (K6974_12975)	-	2605552..2605755 (-)	204	WP_222337435.1	hypothetical protein	-
K6974_RS13115 (K6974_12980)	-	2605920..2606093 (-)	174	WP_222337436.1	hypothetical protein	-
K6974_RS13120 (K6974_12985)	-	2606181..2606939 (-)	759	WP_222337437.1	Rha family transcriptional regulator	-
K6974_RS13125 (K6974_12990)	-	2606958..2607155 (-)	198	WP_222337438.1	helix-turn-helix transcriptional regulator	-
K6974_RS13130 (K6974_12995)	-	2607365..2607886 (+)	522	WP_222337439.1	helix-turn-helix domain-containing protein	-
K6974_RS13135 (K6974_13000)	-	2608490..2609656 (+)	1167	WP_222337440.1	site-specific integrase	-
K6974_RS13140 (K6974_13005)	yaaA	2609794..2610177 (+)	384	WP_222337441.1	S4 domain-containing protein YaaA	-
K6974_RS13145 (K6974_13010)	recF	2610180..2611274 (+)	1095	WP_222337442.1	DNA replication/repair protein RecF	Machinery gene
K6974_RS13150 (K6974_13015)	-	2611462..2612751 (-)	1290	WP_392338569.1	IS4 family transposase	-
K6974_RS13155 (K6974_13020)	guaB	2612860..2614341 (-)	1482	WP_105178906.1	IMP dehydrogenase	-
K6974_RS13160 (K6974_13025)	trpS	2614563..2615588 (-)	1026	WP_024378803.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42246.29 Da
• Isoelectric Point: 6.7885

>NTDB_id=527299 K6974_RS13145 WP_222337442.1 2610180..2611274(+) (recF) [Streptococcus suis strain FJSM5]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLEKLEEFGNRKVQEISGNREELTIEYKTSIELTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDVAFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDNLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=527299 K6974_RS13145 WP_222337442.1 2610180..2611274(+) (recF) [Streptococcus suis strain FJSM5]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTATTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCACTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCTAATTA
CATTGGACATATGAACGTCGTCCTATTTGCTCCAGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTAGGGCAAATCAAACCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAGAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACAAAACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGGTAGTCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTGGCTGAAATCG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAATTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	69.806	99.176	0.692
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442