Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   I6I79_RS17275 Genome accession   NZ_CP068126
Coordinates   3471916..3473184 (-) Length   422 a.a.
NCBI ID   WP_074536773.1    Uniprot ID   -
Organism   Enterococcus casseliflavus strain FDAARGOS_1122     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3466916..3478184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I79_RS17270 (I6I79_17270) - 3470137..3471846 (-) 1710 WP_201689611.1 proline--tRNA ligase -
  I6I79_RS17275 (I6I79_17275) eeP 3471916..3473184 (-) 1269 WP_074536773.1 RIP metalloprotease RseP Regulator
  I6I79_RS17280 (I6I79_17280) - 3473334..3474140 (-) 807 WP_010749318.1 phosphatidate cytidylyltransferase -
  I6I79_RS17285 (I6I79_17285) - 3474137..3474937 (-) 801 WP_010749317.1 isoprenyl transferase -
  I6I79_RS17290 (I6I79_17290) frr 3475129..3475686 (-) 558 WP_005229434.1 ribosome recycling factor -
  I6I79_RS17295 (I6I79_17295) pyrH 3475688..3476410 (-) 723 WP_005229433.1 UMP kinase -
  I6I79_RS17300 (I6I79_17300) tsf 3476558..3477439 (-) 882 WP_005229432.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45413.68 Da        Isoelectric Point: 4.4845

>NTDB_id=527299 I6I79_RS17275 WP_074536773.1 3471916..3473184(-) (eeP) [Enterococcus casseliflavus strain FDAARGOS_1122]
MKTILVFIIIFSVVVVIHEFGHYFFAKRAGILVREFAIGMGPKLFAHQAKDGTTYTIRMLPLGGYVQMAGWGEDETELTP
GMPVSLVQDATGKVIKINTSKKIQLPQAIPMEVTDFDLEEKLTITGFINGNEQEAVTYAVDHDATIIHEDGVEVRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILSLVLFTGLVFAQGGVANQDATIVTGIEAGTPAAEAGLQNGDEILAVEGVDVSNWS
ELTTEIQKYPDTQIALAVKRGSETLDLTATPASQESGETTIGFLGITASLKTGIGDILLGGLQTTIDNSLVIFRAVGNLI
AQPDINKLGGPVAIFQLSSQAASQGVTTVIAMMAMISINLGIFNLLPIPGLDGGKLVLNILEGLRGKPISQEKEGIITLI
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=527299 I6I79_RS17275 WP_074536773.1 3471916..3473184(-) (eeP) [Enterococcus casseliflavus strain FDAARGOS_1122]
ATGAAAACGATACTTGTATTTATCATTATCTTTTCCGTAGTGGTAGTGATTCACGAGTTTGGACACTACTTCTTTGCAAA
ACGGGCAGGTATTTTAGTAAGAGAGTTTGCCATCGGTATGGGGCCTAAATTGTTCGCGCATCAAGCGAAAGATGGGACGA
CCTACACGATTCGGATGCTGCCATTAGGCGGGTATGTCCAAATGGCGGGCTGGGGTGAAGATGAAACAGAATTAACACCA
GGTATGCCAGTCTCCTTGGTTCAAGATGCAACTGGCAAAGTTATCAAAATCAATACGAGCAAAAAGATCCAATTGCCGCA
AGCGATCCCTATGGAAGTGACCGACTTTGACTTGGAGGAGAAGTTGACGATCACAGGGTTCATCAATGGCAATGAACAAG
AAGCGGTTACGTACGCTGTGGATCATGATGCAACGATCATTCATGAAGATGGCGTTGAAGTTCGGATCGCACCTAAAGAC
GTTCAATTCCAGTCCGCAAAGCTTTGGCAGCGAATGCTGACGAATTTTGCTGGACCGATGAACAACTTTATTTTATCCTT
GGTCTTATTCACTGGGTTGGTGTTTGCACAAGGTGGTGTTGCGAATCAAGATGCAACCATCGTGACAGGAATCGAAGCAG
GAACACCGGCAGCTGAAGCAGGGCTGCAAAATGGCGATGAAATCTTAGCTGTCGAAGGTGTCGATGTTTCCAACTGGTCA
GAATTAACGACTGAGATCCAAAAGTACCCAGATACTCAGATTGCTCTAGCAGTCAAACGAGGATCAGAAACACTTGATTT
GACGGCAACTCCTGCGAGTCAAGAATCAGGGGAGACCACGATTGGTTTCTTAGGGATCACCGCTTCCTTAAAAACTGGGA
TCGGAGATATCTTACTGGGTGGCTTGCAAACGACCATTGACAATTCACTGGTGATTTTTAGAGCAGTCGGCAACTTGATT
GCCCAACCAGATATCAATAAATTGGGTGGACCGGTTGCGATTTTCCAACTGTCTTCTCAAGCCGCATCGCAAGGTGTCAC
AACGGTGATCGCGATGATGGCGATGATTTCTATCAACTTGGGGATCTTTAATTTATTACCGATTCCTGGATTGGATGGCG
GTAAGCTGGTTTTAAATATTTTAGAAGGTTTGCGAGGCAAGCCAATCAGCCAAGAAAAAGAAGGCATCATTACTCTGATT
GGGTTTGGGTTTTTGATGCTGCTGATGGTTCTCGTTACCTGGAATGATATTCAACGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(207-260)

Peptidase family M50 (Peptidase_M50)

(7-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

52.225

100

0.528
  eeP Streptococcus thermophilus LMG 18311

51.288

100

0.519