Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   I6J07_RS06750 Genome accession   NZ_CP068063
Coordinates   1358127..1358690 (-) Length   187 a.a.
NCBI ID   WP_002508070.1    Uniprot ID   A0AAP7LV23
Organism   Staphylococcus equorum strain FDAARGOS_1150     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1353127..1363690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J07_RS06705 (I6J07_06715) - 1353129..1353443 (-) 315 WP_002508063.1 ArsR/SmtB family transcription factor -
  I6J07_RS06710 (I6J07_06720) - 1353600..1353920 (+) 321 WP_002512249.1 ArsR/SmtB family transcription factor -
  I6J07_RS06715 (I6J07_06725) - 1353996..1354880 (+) 885 WP_002508065.1 permease -
  I6J07_RS06720 (I6J07_06730) - 1354894..1355007 (+) 114 WP_002508066.1 hypothetical protein -
  I6J07_RS06725 (I6J07_06735) - 1355158..1355571 (-) 414 WP_002508067.1 universal stress protein -
  I6J07_RS06730 (I6J07_06740) - 1355585..1357036 (-) 1452 WP_002508068.1 SulP family inorganic anion transporter -
  I6J07_RS06735 (I6J07_06745) - 1357146..1357688 (+) 543 WP_002508069.1 recombinase family protein -
  I6J07_RS06750 (I6J07_06760) comK/comK1 1358127..1358690 (-) 564 WP_002508070.1 competence protein ComK Regulator
  I6J07_RS06755 (I6J07_06765) - 1358944..1359162 (+) 219 WP_002508071.1 IDEAL domain-containing protein -
  I6J07_RS06760 (I6J07_06770) - 1359262..1360251 (-) 990 WP_002508072.1 lipoate--protein ligase -
  I6J07_RS06765 (I6J07_06775) - 1360452..1360637 (+) 186 WP_002508073.1 YkvS family protein -
  I6J07_RS06770 (I6J07_06780) - 1360644..1361246 (+) 603 WP_002508074.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  I6J07_RS06775 (I6J07_06785) - 1361508..1363016 (-) 1509 WP_002508075.1 bifunctional metallophosphatase/5'-nucleotidase -

Sequence

Protein


Download         Length: 187 a.a.        Molecular weight: 22058.46 Da        Isoelectric Point: 9.1458

>NTDB_id=526881 I6J07_RS06750 WP_002508070.1 1358127..1358690(-) (comK/comK1) [Staphylococcus equorum strain FDAARGOS_1150]
MIQQYIIKKGDMALQPCNLSIGLNEGTCVLKYKEERDIVKERTHKIIDRSCRFYGSSYVFKKEDTMRITGINSKPPILFT
PLFPTYFFPTHSDRKEENTWINIHYVQTIRALKDKKCKITFVDNQTIVVNISAHSMHHQYLNGIYYYYMMDRAARVATFD
PESPIDYTKPQLNIYEALAKYSLFENK

Nucleotide


Download         Length: 564 bp        

>NTDB_id=526881 I6J07_RS06750 WP_002508070.1 1358127..1358690(-) (comK/comK1) [Staphylococcus equorum strain FDAARGOS_1150]
ATGATTCAACAATACATTATTAAAAAAGGTGATATGGCTCTTCAACCTTGTAATTTATCTATAGGACTAAATGAAGGTAC
TTGTGTATTAAAGTATAAGGAGGAGCGTGATATCGTAAAGGAACGGACACATAAGATTATAGATCGTTCATGTAGATTTT
ATGGTAGCAGCTATGTATTTAAAAAAGAAGACACAATGAGAATTACAGGTATTAATAGTAAACCCCCGATATTATTCACT
CCATTATTTCCTACTTATTTTTTTCCTACACATTCAGACCGAAAAGAAGAAAACACTTGGATCAATATTCATTATGTACA
AACCATAAGAGCTTTAAAAGATAAAAAATGTAAAATCACATTTGTCGATAACCAGACTATAGTTGTTAATATTTCAGCAC
ACAGTATGCATCATCAATACTTAAATGGTATATATTATTACTATATGATGGATAGAGCAGCTAGGGTGGCTACTTTTGAT
CCTGAATCTCCTATAGACTATACGAAACCACAATTAAATATTTATGAAGCATTAGCAAAATATTCTCTATTTGAAAATAA
ATAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(3-152)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

51.913

97.861

0.508
  comK/comK1 Staphylococcus aureus N315

51.913

97.861

0.508