Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | I6J07_RS01930 | Genome accession | NZ_CP068063 |
| Coordinates | 379008..379427 (+) | Length | 139 a.a. |
| NCBI ID | WP_002507087.1 | Uniprot ID | A0A1E5TFZ6 |
| Organism | Staphylococcus equorum strain FDAARGOS_1150 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 374008..384427
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J07_RS01900 (I6J07_01900) | atpD | 374046..375458 (+) | 1413 | WP_002507081.1 | F0F1 ATP synthase subunit beta | - |
| I6J07_RS01905 (I6J07_01905) | - | 375478..375882 (+) | 405 | WP_002507082.1 | F0F1 ATP synthase subunit epsilon | - |
| I6J07_RS01910 (I6J07_01910) | - | 376205..376438 (+) | 234 | WP_002507083.1 | DUF1146 family protein | - |
| I6J07_RS01915 (I6J07_01915) | murA | 376545..377810 (+) | 1266 | WP_002507084.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| I6J07_RS01920 (I6J07_01920) | fabZ | 377868..378308 (+) | 441 | WP_002507085.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| I6J07_RS01925 (I6J07_01925) | - | 378377..378817 (-) | 441 | WP_002507086.1 | YwpF-like family protein | - |
| I6J07_RS01930 (I6J07_01930) | ssb | 379008..379427 (+) | 420 | WP_002507087.1 | single-stranded DNA-binding protein | Machinery gene |
| I6J07_RS01935 (I6J07_01935) | - | 379911..380552 (+) | 642 | WP_103170213.1 | transglycosylase family protein | - |
| I6J07_RS01940 (I6J07_01940) | tenA | 380945..381634 (+) | 690 | WP_002507089.1 | thiaminase II | - |
| I6J07_RS01945 (I6J07_01945) | thiD | 381627..382448 (+) | 822 | WP_002507090.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| I6J07_RS01950 (I6J07_01950) | thiM | 382441..383232 (+) | 792 | WP_103170215.1 | hydroxyethylthiazole kinase | - |
| I6J07_RS01955 (I6J07_01955) | thiE | 383232..383870 (+) | 639 | WP_002507092.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16259.49 Da Isoelectric Point: 4.8624
>NTDB_id=526863 I6J07_RS01930 WP_002507087.1 379008..379427(+) (ssb) [Staphylococcus equorum strain FDAARGOS_1150]
MINNIVIVGRLTKDPKIYEKEGKKLATFCVAVNRNYKDKDQNTVCDYLYCKAFGKIADNIEKYINQGSLVGITGQMQSRK
FEKEGQMHFVSELYIETIKFMSPRTKNETDELFEPFPLEQDHESFNEINIQENDIYEIV
MINNIVIVGRLTKDPKIYEKEGKKLATFCVAVNRNYKDKDQNTVCDYLYCKAFGKIADNIEKYINQGSLVGITGQMQSRK
FEKEGQMHFVSELYIETIKFMSPRTKNETDELFEPFPLEQDHESFNEINIQENDIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=526863 I6J07_RS01930 WP_002507087.1 379008..379427(+) (ssb) [Staphylococcus equorum strain FDAARGOS_1150]
ATGATAAATAACATCGTCATTGTAGGACGATTAACAAAAGATCCCAAAATTTATGAAAAGGAGGGGAAGAAGTTAGCTAC
CTTTTGTGTAGCAGTAAATAGAAATTATAAAGATAAAGATCAAAATACAGTCTGTGATTATTTGTATTGTAAAGCATTTG
GTAAAATTGCTGACAATATTGAAAAGTATATCAATCAAGGATCACTTGTAGGTATTACTGGACAAATGCAATCACGTAAA
TTTGAAAAAGAAGGACAGATGCATTTTGTATCAGAACTTTATATCGAAACAATTAAATTCATGTCTCCACGAACTAAAAA
TGAAACGGATGAACTTTTTGAACCATTCCCATTAGAGCAAGATCATGAATCATTCAACGAAATTAATATTCAAGAAAATG
ATATATACGAAATTGTATAA
ATGATAAATAACATCGTCATTGTAGGACGATTAACAAAAGATCCCAAAATTTATGAAAAGGAGGGGAAGAAGTTAGCTAC
CTTTTGTGTAGCAGTAAATAGAAATTATAAAGATAAAGATCAAAATACAGTCTGTGATTATTTGTATTGTAAAGCATTTG
GTAAAATTGCTGACAATATTGAAAAGTATATCAATCAAGGATCACTTGTAGGTATTACTGGACAAATGCAATCACGTAAA
TTTGAAAAAGAAGGACAGATGCATTTTGTATCAGAACTTTATATCGAAACAATTAAATTCATGTCTCCACGAACTAAAAA
TGAAACGGATGAACTTTTTGAACCATTCCCATTAGAGCAAGATCATGAATCATTCAACGAAATTAATATTCAAGAAAATG
ATATATACGAAATTGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
61.594 |
99.281 |
0.612 |
| ssb | Staphylococcus aureus MW2 |
60.87 |
99.281 |
0.604 |