Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I6J14_RS08265 Genome accession   NZ_CP068057
Coordinates   1624914..1625687 (-) Length   257 a.a.
NCBI ID   WP_115253230.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1619914..1630687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS08240 (I6J14_08240) ychF 1620026..1621141 (-) 1116 WP_115252482.1 redox-regulated ATPase YchF -
  I6J14_RS08245 (I6J14_08245) - 1621273..1621638 (-) 366 WP_115252481.1 helix-turn-helix transcriptional regulator -
  I6J14_RS08250 (I6J14_08250) - 1621763..1621960 (-) 198 WP_003048966.1 DUF951 family protein -
  I6J14_RS08255 (I6J14_08255) dnaN 1622035..1623171 (-) 1137 WP_115252480.1 DNA polymerase III subunit beta -
  I6J14_RS08260 (I6J14_08260) dnaA 1623325..1624680 (-) 1356 WP_003048960.1 chromosomal replication initiator protein DnaA -
  I6J14_RS08265 (I6J14_08265) spo0J 1624914..1625687 (-) 774 WP_115253230.1 ParB/RepB/Spo0J family partition protein Regulator
  I6J14_RS08270 (I6J14_08270) htrA 1625802..1627022 (-) 1221 WP_003048956.1 trypsin-like peptidase domain-containing protein Regulator
  I6J14_RS08275 (I6J14_08275) rlmH 1627232..1627711 (+) 480 WP_115253229.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 28976.84 Da        Isoelectric Point: 9.8968

>NTDB_id=526747 I6J14_RS08265 WP_115253230.1 1624914..1625687(-) (spo0J) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MTELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKTNGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHEEVAKYMGKSRPYISNTLRLLQLPKIISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKSIPIPKNKNIFITSLEDQLAQSLGLPVKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=526747 I6J14_RS08265 WP_115253230.1 1624914..1625687(-) (spo0J) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGACTGAACTATTGAAATCTATTCCAATTGAAGATATTGTAGCCAATCCCTATCAACCAAGGCTTCAGTTTAATCAAAA
AGAACTAGAAGATTTGGCTAATTCAATCAAGACAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTTGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAAGTACCTGCTATTGTCAAA
AACATGTCCTCTTTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTGCAACGTGCTGATTTGAATCCCATTGAAGAAGC
AAAAGCTTATCAGCTACTGATTGAAAAAAATCAAATGACGCATGAAGAGGTTGCCAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTACTGCAACTTCCGAAAATAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACAGACGAAAAGGAACAGTTAGTTTACGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTACGACAAATTGAGCATATGGTAACTCCAAAACTTAAAAGTATTCCTATCCCAAAAAATAAAAATATTTTTATCACCT
CTTTAGAAGATCAGCTGGCCCAATCTCTAGGGTTACCAGTCAAAATCAAATTGAAATCAACTCAAAGTGGTCAATTGCTG
TTACCATTTGCTAACCAAGAGGAACTAAACAGAATTATCAACAAGCTACTTTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-195)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.203

99.611

0.58