Detailed information NTG0526695

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: I6J15_RS07085
• Genome accession: NZ_CP068056
• Coordinates: 1403849..1405078 (+)
• Length: 409 a.a.
• NCBI ID: WP_020916897.1
• Uniprot ID: A0AB33AMD1
• Organism: Streptococcus lutetiensis strain FDAARGOS_1158
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1398849..1410078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J15_RS07065 (I6J15_07065)	-	1399442..1400713 (-)	1272	WP_111712848.1	hydroxymethylglutaryl-CoA reductase, degradative	-
I6J15_RS07070 (I6J15_07070)	-	1400703..1401878 (-)	1176	WP_058813991.1	hydroxymethylglutaryl-CoA synthase	-
I6J15_RS07075 (I6J15_07075)	-	1402206..1403045 (+)	840	WP_111712847.1	thymidylate synthase	-
I6J15_RS07080 (I6J15_07080)	-	1403128..1403622 (+)	495	WP_020916898.1	dihydrofolate reductase	-
I6J15_RS07085 (I6J15_07085)	clpX	1403849..1405078 (+)	1230	WP_020916897.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
I6J15_RS07090 (I6J15_07090)	yihA	1405089..1405682 (+)	594	WP_043895055.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
I6J15_RS07095 (I6J15_07095)	-	1405791..1407199 (+)	1409	Protein_1367	amino acid permease	-
I6J15_RS07100 (I6J15_07100)	mmuM	1407210..1408156 (+)	947	Protein_1368	homocysteine S-methyltransferase	-
I6J15_RS07105 (I6J15_07105)	-	1408189..1408857 (-)	669	WP_043895254.1	YoaK family protein	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45224.79 Da
• Isoelectric Point: 4.5119

>NTDB_id=526695 I6J15_RS07085 WP_020916897.1 1403849..1405078(+) (clpX) [Streptococcus lutetiensis strain FDAARGOS_1158]
MVGNRTNDVKVYCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLATLDEYVVGQER
AKRALAVAVYNHYKRVSFAESRDEEDVELQKSNILLIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQINTK
NILFIVGGAFDGIEDIVKQRLGEKVIGFGQNNRKIDEDASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLTTDDLVRI
LTEPRNALVKQYQTLLSYDGVELEFDEDALQAIANKAIERKTGARGLRSIIEETMMDIMFEIPSRVEVTKVRITKDAVEG
KDKPILEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=526695 I6J15_RS07085 WP_020916897.1 1403849..1405078(+) (clpX) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGGTTGGAAATCGAACAAATGATGTAAAAGTTTATTGCTCATTTTGTGGAAAAAGCCAAGACGAAGTAAAAAAAATCAT
TGCCGGAAATAACGTATTTATCTGTAATGAATGTGTGGCTTTATCCCAAGAAATTATTAAAGAGGAGTTAGCAGAAGAAG
TTCTCGCAGATTTGGCTGAAGTTCCAAAACCAAAAGAATTATTAGCAACCCTCGATGAATATGTTGTCGGTCAAGAACGC
GCTAAACGTGCCCTCGCAGTGGCTGTATACAACCACTACAAACGTGTTTCATTTGCCGAAAGTCGTGATGAAGAAGATGT
TGAATTGCAAAAATCTAACATCTTATTGATTGGACCAACTGGTTCAGGGAAAACTTTCCTTGCTCAAACCTTGGCGAAAA
GTTTAAACGTTCCATTTGCGATTGCTGATGCGACATCATTGACAGAAGCAGGATACGTTGGTGAAGACGTTGAAAATATC
CTTTTGAAACTCATTCAAGCAGCTGATTTTAATATTGAACGCGCAGAACGTGGTATCATCTACGTGGATGAAATTGATAA
AATTGCCAAAAAAGGTGAAAATGTCTCAATCACTCGTGATGTTTCAGGCGAAGGTGTTCAACAAGCTCTTCTTAAAATTA
TTGAAGGAACAGTTGCTAGCGTGCCACCACAAGGTGGTCGTAAACACCCGAACCAAGAAATGATTCAAATCAATACTAAG
AATATCCTTTTCATCGTTGGTGGTGCTTTTGACGGTATTGAAGATATTGTTAAACAACGTCTCGGTGAAAAAGTTATTGG
TTTTGGTCAAAATAACCGTAAGATCGATGAAGATGCTTCTTATATGCAAGAAATTATCTCGGAAGATATTCAGAAATTTG
GTTTAATTCCTGAATTTATCGGACGTTTGCCAGTCGTTGCTGCCCTTGAACAATTGACAACAGATGATTTGGTACGAATC
TTGACAGAACCTCGTAATGCCTTGGTTAAACAATACCAAACGCTTCTATCATATGATGGTGTTGAGTTGGAATTTGATGA
AGATGCCCTTCAAGCTATTGCTAATAAAGCAATCGAACGTAAGACAGGTGCACGTGGACTTCGTTCAATCATTGAAGAAA
CAATGATGGATATCATGTTTGAAATTCCAAGTCGTGTAGAGGTCACTAAAGTCCGTATTACAAAAGATGCCGTTGAAGGC
AAAGATAAACCAATTTTAGAGATTGCCTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	88.998	100	0.89
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.853	98.044	0.577