Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6J15_RS06975 Genome accession   NZ_CP068056
Coordinates   1381455..1383269 (+) Length   604 a.a.
NCBI ID   WP_020916924.1    Uniprot ID   A0AB33AM14
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1376455..1388269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS06945 (I6J15_06945) queF 1377182..1377673 (+) 492 WP_058814005.1 preQ(1) synthase -
  I6J15_RS06950 (I6J15_06950) - 1377710..1378207 (-) 498 WP_111712859.1 HdeD family acid-resistance protein -
  I6J15_RS06955 (I6J15_06955) gdhA 1378444..1379793 (+) 1350 WP_043895060.1 NADP-specific glutamate dehydrogenase -
  I6J15_RS09210 - 1379951..1380265 (+) 315 WP_233422855.1 hypothetical protein -
  I6J15_RS09215 - 1380274..1380459 (+) 186 WP_231872486.1 GNAT family N-acetyltransferase -
  I6J15_RS06965 (I6J15_06965) - 1380456..1380866 (+) 411 WP_111712858.1 peptide deformylase -
  I6J15_RS06970 (I6J15_06970) rcrR 1381011..1381451 (+) 441 WP_111712857.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  I6J15_RS06975 (I6J15_06975) rcrP 1381455..1383269 (+) 1815 WP_020916924.1 ABC transporter ATP-binding protein Regulator
  I6J15_RS06980 (I6J15_06980) rcrQ 1383259..1385031 (+) 1773 WP_020916923.1 ABC transporter ATP-binding protein Regulator
  I6J15_RS06985 (I6J15_06985) - 1385131..1385766 (+) 636 WP_020916922.1 GTP pyrophosphokinase family protein -
  I6J15_RS06990 (I6J15_06990) - 1385769..1386449 (+) 681 WP_020916921.1 response regulator transcription factor -
  I6J15_RS06995 (I6J15_06995) - 1386458..1387684 (+) 1227 WP_020916920.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67041.98 Da        Isoelectric Point: 5.7821

>NTDB_id=526693 I6J15_RS06975 WP_020916924.1 1381455..1383269(+) (rcrP) [Streptococcus lutetiensis strain FDAARGOS_1158]
MLKIFKRLTAKEIIMMIIAVLFVCLNVFLDLKIPDYMSDITSLLSTQGTKAKDIFAWNLDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLDFSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGLQVITKGPIMAIWAITKIADKNH
EWLMVLVVAVAVMILMLIFLLMMVMPKQRMIQKLTDKLNSITRESLTGIRVVRAYNAESYQDGKFAKANDNVTNFNLFIN
RSMALMSPVMTSISSGMTLAIYWIGAFLIEDIAIPKDPTKIAGAMQDKVNIFSDMVVYSSYAMQVVIGFMMMIIVFFILP
RAVVAAGRINEVLDTKPSVTYPEESKAQPAEKGSVEFDDVSFRYSEHSEAVLEHVSFKAKAGDTVAFIGSTGSGKSTLVN
LIPRFYDASEGTIKVDGVDVRDYDHDTLHKIVGYIPQKAVLFSGDIASNMDMGDSNSSPLDDDKMWEALDLAQGKDFVES
KEGQLKAKVSQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTADMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNEVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=526693 I6J15_RS06975 WP_020916924.1 1381455..1383269(+) (rcrP) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGTTAAAAATTTTTAAACGTTTAACGGCAAAAGAAATCATCATGATGATTATTGCCGTCTTATTTGTGTGTTTGAATGT
TTTCTTGGATTTAAAAATTCCAGATTACATGTCTGATATCACATCTTTACTCTCAACTCAAGGAACAAAAGCAAAAGATA
TTTTTGCTTGGAATCTAGATGCCCCAGGTATGCGTATGGTCTTGCTTTCTTTAGGAAGTTTTGCAGCCTCTGTGGTTGTC
GGATTCTTAGCCGCACGCATCGCAGCAAGTTTCAGTACGCGTTTGCGTGATGATATTTTCCATAGTGTTTTGGACTTTTC
AGATGCGGAAATTAAGAAATTTTCAATTCCAAGTCTTTTAACACGTACAACAAATGACATTACTCAAATTCAGTTGGTCT
TTACCATGGGACTTCAAGTTATTACCAAAGGACCAATTATGGCAATCTGGGCTATTACGAAGATTGCTGATAAAAACCAT
GAGTGGTTGATGGTGCTGGTTGTAGCAGTGGCTGTCATGATTTTAATGTTGATTTTCTTGCTCATGATGGTAATGCCAAA
ACAACGCATGATTCAAAAATTAACGGATAAATTGAACAGTATTACACGTGAATCTTTGACTGGTATTCGTGTTGTTCGTG
CTTACAATGCCGAAAGTTATCAAGATGGTAAATTTGCTAAAGCCAATGATAACGTGACAAACTTTAACCTCTTTATCAAC
CGTTCAATGGCTTTGATGTCACCAGTCATGACAAGTATTTCAAGCGGGATGACTTTGGCAATTTATTGGATTGGTGCTTT
CCTGATTGAAGATATTGCTATTCCAAAAGACCCAACTAAGATTGCTGGTGCCATGCAAGATAAGGTAAATATCTTCTCAG
ATATGGTGGTTTATTCCTCATATGCCATGCAAGTTGTTATTGGTTTTATGATGATGATTATCGTTTTCTTCATTCTTCCC
CGTGCGGTTGTCGCTGCAGGTCGTATTAATGAAGTCTTGGATACGAAGCCATCTGTTACTTATCCTGAAGAAAGTAAAGC
TCAGCCGGCCGAAAAAGGTTCTGTTGAATTTGATGACGTGTCTTTCCGCTACAGCGAGCATTCGGAAGCTGTTTTGGAAC
ATGTTTCCTTTAAGGCTAAAGCAGGTGATACGGTTGCCTTTATCGGATCAACAGGTTCTGGTAAATCTACTCTAGTTAAT
TTGATTCCTCGTTTCTATGATGCAAGTGAAGGAACAATCAAAGTTGACGGTGTTGACGTTCGTGATTACGATCATGACAC
CCTTCACAAGATTGTTGGTTACATTCCGCAAAAAGCTGTGCTCTTTAGTGGAGACATTGCTTCAAATATGGACATGGGTG
ACAGCAATAGTTCACCGCTTGATGATGATAAGATGTGGGAAGCACTTGATTTGGCACAAGGTAAAGATTTCGTTGAAAGT
AAAGAGGGTCAACTAAAAGCTAAAGTCTCCCAAGGTGGTCAAAACTTCTCAGGTGGTCAAAAACAACGCTTGGCGATTGC
GCGTGCCCTTGCTCGTAAACCTGAAATTATCATCTTTGATGATTCATTCTCAGCGCTTGATTATAAGACTGACCGAATCC
TTCGTTCTCAATTGAAAGAACGTACAGCTGACATGACTAAGTTGATTGTTGCCCAACGTATTTCAACAATCATGGATGCT
GATCAGATCTTAGTCTTGGATGAAGGTAAAGTAGTTGGTCAAGGTACTCACGAAGAATTGCTTGCAAATAATGAAGTTTA
TCGTGAAATTGCCTATTCACAATTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(16-270)

ABC transporter (ABC_tran)

(372-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

67.273

100

0.674