Detailed information NTG0526581

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: K6975_RS05040
• Genome accession: NZ_CP082197
• Coordinates: 1017373..1020639 (-)
• Length: 1088 a.a.
• NCBI ID: WP_222759068.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Transconjugant cSS389
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1012373..1025639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6975_RS05030 (K6975_05030)	plsY	1012791..1013435 (+)	645	WP_167787147.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
K6975_RS05035 (K6975_05035)	rexA	1013723..1017373 (-)	3651	WP_222759066.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
K6975_RS05040 (K6975_05040)	rexB	1017373..1020639 (-)	3267	WP_222759068.1	ATP-dependent nuclease subunit B	Machinery gene

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124421.59 Da
• Isoelectric Point: 5.0862

>NTDB_id=526581 K6975_RS05040 WP_222759068.1 1017373..1020639(-) (rexB) [Streptococcus suis strain Transconjugant cSS389]
MKLVYTDIRNPLTQYLTDTAAEFAKEAKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDDVGLAMIFFRVLSQFDDGDLKVYGRLQTDFGFINQLVALYKELQRANMSILDLEAMESPDKQADLVKIFLAVTDILSK
EGFEHQSKLAQLTCLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQATYAEGNVYQAN
VDFLRQLSAQFQTKTTYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQK
ELDLFESYILFADMKGQAAFSRAFSVNGRADYDIETVKEKRLVYDLTVLEPLRAKIMEPLNQLFKAGPQSGTALLEKFMA
FLEAIDLPKNMEKMSRNLSEVEQEKEEQVWKSFTHILENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKINLVSANSSRFDLVSRENIKKNHAAMMSLINSATEQLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRMNTLSPQDIGHYKSLLSRLIESERPSLDNEEWEGQTAFWTVLVRHLKKK
LESQGIEIPTITGEITSKQLAADTLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSDLDFDQKVDKAILHTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEGSLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAKDILDGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLIKEAKRQDWMERMKGGQD

Nucleotide

• Length: 3267 bp

>NTDB_id=526581 K6975_RS05040 WP_222759068.1 1017373..1020639(-) (rexB) [Streptococcus suis strain Transconjugant cSS389]
ATGAAATTAGTCTATACAGATATTCGTAATCCTCTGACGCAGTATTTAACGGATACCGCAGCAGAATTTGCTAAGGAAGC
TAAGCGAGTTTTTTACATTGCTCCAAACTCTCTATCCTTTGAGATGGAGCGCAAGGTCTTGGAATATTTGCCTGAACAGG
CAACTTTTGATATTATCGTGACTCGTTTTGGGCAATTGGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATGATGTTGGTCTGGCTATGATTTTCTTTCGTGTGCTATCGCAATTTGATGATGGCGACTTGAAAGTCTATGGTCG
TTTACAGACAGATTTTGGGTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGAGTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGGCTGTAACAGACATTTTGTCCAAA
GAAGGCTTTGAGCATCAGTCTAAGTTAGCACAGCTGACTTGCTTGGTGGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTGATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGCGACCTATGCGGAAGGGAACGTTTATCAAGCCAAC
GTTGACTTTTTACGTCAGTTATCAGCGCAGTTCCAGACTAAGACTACTTATATTGGTCAAGAGCCAGTCTTGGACAGTAT
TGGTAAATTTTCAAAGAATATGGAAGCCTATTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCTGACCAAGAAA
AAATCCAGCTATGGGAAGTTGTCAACCAAAAAGAAGAAGTTGAGCAGGTTGCGACTGCAATTCGTCAGCATGTGCATCAA
GGGGCTCGCTATAAAGACATCTTGTTGCTCTTGGGTGATGTGGATAGCTACAAGTTGCAGATTGGTAAGATTTTTGACAA
GTATGATATTCCTTACTATTTTGGTAAGGCAGAGGAGATGAGTCATCATCCCCTGGTCCATTTTGTGGAGTCCTTGGAGC
GCTTGCGTCGCTATCGTTTCCGAGCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GAGCTGGACCTATTTGAGTCTTACATCCTTTTTGCGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTTCGGTCAA
TGGCAGAGCGGATTACGATATTGAGACTGTCAAGGAGAAGCGACTTGTCTATGATTTGACTGTCTTGGAACCACTACGTG
CTAAGATTATGGAGCCTTTGAACCAGCTGTTTAAGGCTGGACCACAATCTGGAACTGCCTTGCTTGAGAAATTTATGGCA
TTTTTGGAGGCAATTGATCTTCCTAAAAATATGGAAAAAATGTCTCGAAATTTGAGTGAGGTAGAGCAAGAAAAAGAAGA
ACAGGTCTGGAAAAGTTTTACCCATATTCTAGAGAATTTTCATCAGATTTTTGGAAAAGAAAAATTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGCATGCAGGCCAGTCACTATCGTACCGTTCCTGCAACGGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCGCACACTGCTAAGTATGTTTATGCTATCGGAATGGGCCAGTCCAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTGACAGAAGAAGAGATGGAGAAAATCAATCTTGTTTCGGCTAATTCTTCACGTTTTGATTTGG
TCAGCCGAGAGAATATCAAGAAGAACCATGCTGCCATGATGTCTCTGATTAATTCTGCGACGGAACAGTTAGTTATTTCT
ACACCTCAGATTTATAACGAAGGCGAAGATAGTCTCTCCCCTTATATCAAGATTCTCCAAAAAATGGGGCTGAAATCCGA
AGAACGTGGTCGGATGAACACACTTAGTCCGCAAGACATCGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCAG
AAAGACCGTCTCTTGATAATGAAGAATGGGAAGGACAGACGGCCTTCTGGACAGTCTTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAGGCATTGAAATTCCGACCATTACTGGCGAAATTACTTCTAAACAACTTGCAGCTGATACCTTGGCTGC
TTTATATCCAGAGGATAAGCCGCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TTCGTAATGTTCTTCGCTTGCGGGAACAGGAATCCATCCATCCGACTGCCTTTCAGCATGGTTTGTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGATCTAGATTTTGATCAAAAAGTGGACAAGGCCATCCTGCATACGCGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAAGATGCGGATGCTCGCTATACGGAGGAGGTGCTGGATAAGATTGCTCGTTCCA
GTGCAACCATTTTGCGGGATAATGATTTGGTTGAAATTGATGGTCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTGGTT
TTTGACCTTCAAAATGGCAAGAGTGTACATGTAAATGGTACAATTGACCGCTTGGATACCTTACAAATCAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGCGACCAATCTTTTTCAGTTGGGGATTTTTACAATGGTCTAAAACCTCAGTTGGTGA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAAGGATAAACCTGTTTTTGGGGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAGTTAAAAGACACAAAGAATTTAGAACAGCTAGAAGGAGCTGCTAATACGAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGGAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGATGAGTTTGCGG
TTTTATTGAACCACAACCAAGAACTCTACAAACAAGCTGCCAAGGACATTCTAGATGGTCGCTTTGCTATTAACCCTTAT
ACCAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGAATGGC
ACGGCGGTTGATCAAAGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCAGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1042)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	44.837	100	0.455