Detailed information NTG0526172

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6128_RS20960
• Genome accession: NZ_CP082100
• Coordinates: 4302352..4303377 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS15047
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4297352..4308377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6128_RS20930 (K6128_20760)	zapB	4297436..4297681 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6128_RS20935 (K6128_20765)	rraA	4297766..4298251 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6128_RS20940 (K6128_20770)	menA	4298344..4299270 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6128_RS20945 (K6128_20775)	hslU	4299337..4300668 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
K6128_RS20950 (K6128_20780)	hslV	4300678..4301208 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6128_RS20955 (K6128_20785)	ftsN	4301301..4302260 (-)	960	WP_000068828.1	cell division protein FtsN	-
K6128_RS20960 (K6128_20790)	cytR	4302352..4303377 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6128_RS20965 (K6128_20795)	priA	4303533..4305731 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
K6128_RS20970 (K6128_20800)	rpmE	4305934..4306146 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6128_RS20975 (K6128_20805)	yiiX	4306207..4306815 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
K6128_RS20980 (K6128_20810)	metJ	4306999..4307316 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=526172 K6128_RS20960 WP_000644904.1 4302352..4303377(-) (cytR) [Escherichia coli strain MS15047]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=526172 K6128_RS20960 WP_000644904.1 4302352..4303377(-) (cytR) [Escherichia coli strain MS15047]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCTGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTTCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628