Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   JJN14_RS01310 Genome accession   NZ_CP067992
Coordinates   271784..272821 (+) Length   345 a.a.
NCBI ID   WP_033687316.1    Uniprot ID   A0A081PU74
Organism   Streptococcus mitis strain S022-V7-A3     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 266784..277821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS01275 (JJN14_01275) yidC 266821..267747 (-) 927 WP_201058706.1 membrane protein insertase YidC -
  JJN14_RS01280 (JJN14_01280) - 267825..268103 (-) 279 WP_001174612.1 acylphosphatase -
  JJN14_RS01285 (JJN14_01285) - 268137..268877 (+) 741 WP_049499185.1 TrmH family RNA methyltransferase -
  JJN14_RS01290 (JJN14_01290) - 268932..269615 (+) 684 WP_042750024.1 Bax inhibitor-1/YccA family protein -
  JJN14_RS01295 (JJN14_01295) asnA 269726..270718 (+) 993 WP_201058707.1 aspartate--ammonia ligase -
  JJN14_RS01300 (JJN14_01300) rsmD 270783..271322 (+) 540 WP_049551837.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  JJN14_RS01305 (JJN14_01305) coaD 271312..271800 (+) 489 WP_201058708.1 pantetheine-phosphate adenylyltransferase -
  JJN14_RS01310 (JJN14_01310) sepM 271784..272821 (+) 1038 WP_033687316.1 SepM family pheromone-processing serine protease Regulator
  JJN14_RS01315 (JJN14_01315) - 272878..273108 (+) 231 WP_063612229.1 DUF1146 family protein -
  JJN14_RS01320 (JJN14_01320) murA 273132..274415 (+) 1284 WP_201058709.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  JJN14_RS01325 (JJN14_01325) - 274408..274596 (+) 189 WP_004241151.1 DNA-directed RNA polymerase subunit beta -
  JJN14_RS01330 (JJN14_01330) endA 274635..275459 (+) 825 WP_042750033.1 DNA-entry nuclease EndA Machinery gene
  JJN14_RS01335 (JJN14_01335) - 275615..276946 (+) 1332 WP_201058710.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37581.58 Da        Isoelectric Point: 4.8665

>NTDB_id=526135 JJN14_RS01310 WP_033687316.1 271784..272821(+) (sepM) [Streptococcus mitis strain S022-V7-A3]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVNSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAR
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=526135 JJN14_RS01310 WP_033687316.1 271784..272821(+) (sepM) [Streptococcus mitis strain S022-V7-A3]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
CTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTCAATGATACAGAAGATAAGGAAGCTG
GGGCTTATCAATTCGTTACGGTTGGTGTTCAGCACGCTACTTTAGCCCATATGATTTATGCGTGGTTGACGCCTTTTACA
GATATTCGTAGTGCCCAAGAGACTACAGGTGGCTCTTCTGATGTTGAATTTATGCGGATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGGCTAAAAACAGCTGGTAAGGATATTGAACTAAAATATCTTGGGGTTTATGTTT
TGACTGTGACGGATAATTCGACCTTTAAAGGGATTCTTAACATCTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGATTTGATTGATTATGTCAATTCTCAAAAACTAGGGGACTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGTAAGATTATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGACCGTA
CAGAAGTGACCAGTGATGTCCCAATTCGCTTTTCAACAGCCGGTATCGGGGGTCCAAGTGCAGGACTCATGTTTAGTCTG
GCCATCTATACTCAAATAGCTGACCCAGGTCTTCGTAATGGCCGTATTGTTGCCGGTACAGGAACCATTGACCGCGATGG
TAATGTGGGGGATATTGGAGGCATTGATAAGAAAGTTGTAGCTTCGGCTAGAGAAGGTGCCGCTATTTTCTTTGCCCCTG
ATAATCCTGTTAGCGAAGAAGAACAAAAAGCGCATCCAGATGCGAAAAACAACTACCAAACAGCCCTAGAAGCAGCTAGA
ACAATCAAGACAGATATGAAAATCGTGCCTGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A081PU74

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.357

99.13

0.588