Detailed information NTG0052566

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: B657_RS02200
• Genome accession: NC_018520
• Coordinates: 428842..429990 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis QB928
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423842..434990

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B657_RS02180 (B657_03730)	yclH	424219..424899 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
B657_RS02185 (B657_03740)	yclI	424915..426375 (-)	1461	WP_003234506.1	ABC transporter permease	-
B657_RS02190 (B657_03750)	yclJ	426588..427271 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
B657_RS02195 (B657_03760)	yclK	427258..428679 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
B657_RS02200 (B657_03770)	rapC	428842..429990 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
B657_RS02205	phrC	429974..430096 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
B657_RS21810	yczM	430196..430285 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
B657_RS02215 (B657_03789)	yczN	430367..430480 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
B657_RS02220 (B657_03790)	thrD	430634..431998 (-)	1365	WP_009966541.1	aspartate kinase	-
B657_RS02225 (B657_03800)	ceuB	432383..433333 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
B657_RS02230 (B657_03810)	yclO	433326..434273 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=52566 B657_RS02200 WP_003246686.1 428842..429990(+) (rapC) [Bacillus subtilis QB928]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=52566 B657_RS02200 WP_003246686.1 428842..429990(+) (rapC) [Bacillus subtilis QB928]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571