Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   JIO02_RS08290 Genome accession   NZ_CP067365
Coordinates   1712985..1714226 (-) Length   413 a.a.
NCBI ID   WP_005689610.1    Uniprot ID   A0A0E3CQJ6
Organism   Lacticaseibacillus rhamnosus strain KF7     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1707985..1719226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JIO02_RS08285 - 1711231..1712961 (-) 1731 WP_039138759.1 proline--tRNA ligase -
  JIO02_RS08290 eeP 1712985..1714226 (-) 1242 WP_005689610.1 RIP metalloprotease RseP Regulator
  JIO02_RS08295 - 1714243..1715031 (-) 789 WP_005711688.1 phosphatidate cytidylyltransferase -
  JIO02_RS08300 - 1715067..1715819 (-) 753 WP_005689614.1 isoprenyl transferase -
  JIO02_RS08305 frr 1716194..1716751 (-) 558 WP_005684323.1 ribosome recycling factor -
  JIO02_RS08310 pyrH 1716751..1717470 (-) 720 WP_193820225.1 UMP kinase -
  JIO02_RS08315 tsf 1717963..1718844 (-) 882 WP_005684325.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45280.89 Da        Isoelectric Point: 8.0452

>NTDB_id=525648 JIO02_RS08290 WP_005689610.1 1712985..1714226(-) (eeP) [Lacticaseibacillus rhamnosus strain KF7]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSIILNDAGKVTRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDEEKLERWSVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLIVNFAGPMNNFILAILTFIIYGLMFGVQVLNTNQIGTVLPGYPAAQAGLKSNATIQAIDGEKIHSFTDL
SSKVSKQAGKSVTFTVKEHGKTQNVVIKPNKDGKIGVEALIEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLQGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIELIRRKPLKPETEGVVTMVGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=525648 JIO02_RS08290 WP_005689610.1 1712985..1714226(-) (eeP) [Lacticaseibacillus rhamnosus strain KF7]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTATTTTGCCAA
GCGCAGCGGAATATTAGTACGTGAGTTTTCCATTGGCATGGGACCTAAGCTATGGGCGTCACATAAGAATAATACGACCT
ATACCTTGCGCTTGTTGCCACTGGGCGGATATGTACGTATGGCTGGCTGGCAAGATGAGGAAGATGAAATCAAGCCCGGG
ACCATGCTGAGTATTATCCTGAATGATGCCGGTAAAGTGACGCGGATTAATGCTAGTGATAAAACAACGCTGGCAGGTGG
CATGCCGGTACAAGTAAGCCGCGTAGACCTCGTTAAAGACTTGGTGATTGAAGGCTACCCTAATGGCGACGAAGAGAAAC
TGGAGCGTTGGTCGGTTGACCATGATGCCACGATTATTGAAGAAGATGGCACCGAAGTTCAAATTGCGCCAGAAGATGTC
CAATTTCAAAATGCTCCGGTTTGGCGGCGTCTAATTGTTAACTTTGCCGGTCCGATGAATAATTTTATTCTTGCCATTTT
GACCTTTATTATTTACGGTTTGATGTTTGGCGTGCAGGTCTTAAATACCAATCAAATTGGAACGGTACTGCCCGGTTATC
CTGCTGCTCAAGCTGGGCTTAAGTCAAATGCCACAATTCAGGCGATTGATGGTGAAAAAATTCATTCTTTTACTGATCTT
TCCAGCAAAGTCAGCAAACAGGCCGGTAAGTCGGTGACGTTTACAGTTAAAGAGCATGGCAAAACGCAAAATGTGGTCAT
CAAGCCTAACAAGGATGGCAAGATCGGTGTGGAAGCACTCATCGAAAAATCACCGGCACGGGCGTTTACGTATGGTTTCA
CCCAAACCTGGGATTTAGCTGTGCGCACTTGGGATGTCCTCAAATCCATGGTGACTGGCGGCTTTTCGCTTAATAAGTTA
GCTGGGCCGGTCGGGATTTATACCATGACCAGTCAAAGTGCTAAAGGCGGATTGCAGGGATTGCTATTCTTTATGGGATA
CTTAAGCCTCGGCTTGGGAATCAGCAATTTGTTGCCAATCCCGGTTCTGGATGGTGGTAAAATTTTACTGAATCTCATTG
AACTGATTCGGCGCAAACCGTTGAAACCTGAAACAGAAGGTGTTGTCACCATGGTTGGCCTCGGGTTGATGGTGCTCCTG
ATGCTCGCCGTGACGATTAATGATATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E3CQJ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.057

100

0.504
  eeP Streptococcus thermophilus LMD-9

48.821

100

0.501