Detailed information NTG0525411

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6O12_RS21070
• Genome accession: NZ_CP082075
• Coordinates: 4360578..4361603 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS20658
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4355578..4366603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6O12_RS21040 (K6O12_20925)	zapB	4355662..4355907 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6O12_RS21045 (K6O12_20930)	rraA	4355992..4356477 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6O12_RS21050 (K6O12_20935)	menA	4356570..4357496 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6O12_RS21055 (K6O12_20940)	hslU	4357563..4358894 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6O12_RS21060 (K6O12_20945)	hslV	4358904..4359434 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K6O12_RS21065 (K6O12_20950)	ftsN	4359527..4360486 (-)	960	WP_000068834.1	cell division protein FtsN	-
K6O12_RS21070 (K6O12_20955)	cytR	4360578..4361603 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
K6O12_RS21075 (K6O12_20960)	priA	4361759..4363957 (-)	2199	WP_001468126.1	primosomal protein N'	Machinery gene
K6O12_RS21080 (K6O12_20965)	rpmE	4364160..4364372 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6O12_RS21085 (K6O12_20970)	yiiX	4364433..4365041 (-)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
K6O12_RS21090 (K6O12_20975)	metJ	4365101..4365418 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=525411 K6O12_RS21070 WP_000644911.1 4360578..4361603(-) (cytR) [Escherichia coli strain MS20658]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=525411 K6O12_RS21070 WP_000644911.1 4360578..4361603(-) (cytR) [Escherichia coli strain MS20658]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATCGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625