Detailed information NTG0052540

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: T15_RS06345
• Genome accession: NC_022665
• Coordinates: 1253608..1256874 (-)
• Length: 1088 a.a.
• NCBI ID: WP_023370606.1
• Uniprot ID: -
• Organism: Streptococcus suis T15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1248608..1261874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
T15_RS06335 (T15_1251)	plsY	1249301..1249945 (+)	645	WP_023370602.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
T15_RS06340 (T15_1252)	rexA	1249955..1253608 (-)	3654	WP_023370604.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
T15_RS06345 (T15_1253)	rexB	1253608..1256874 (-)	3267	WP_023370606.1	ATP-dependent nuclease subunit B	Machinery gene
T15_RS06350 (T15_1254)	-	1257165..1260569 (-)	3405	WP_023370608.1	MucBP domain-containing protein	-
T15_RS11880 (T15_1255)	-	1260576..1260917 (-)	342	WP_023370610.1	YSIRK-type signal peptide-containing protein	-
T15_RS06355 (T15_1256)	-	1261281..1261445 (-)	165	WP_012775058.1	hypothetical protein	-

Sequence

Protein

• Length: 1088 a.a.
• Molecular weight: 124551.80 Da
• Isoelectric Point: 5.1638

>NTDB_id=52540 T15_RS06345 WP_023370606.1 1253608..1256874(-) (rexB) [Streptococcus suis T15]
MKLVYTDIRNPLTQYLTDTSAEFAKEGKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIVTRFGQLARYLMIDRKEAGQP
LDNVGLAMIFFRVLSQFEDGDLKVYGRLQTDFGFINQLVALYKELQRANMSILDLEAMESPDKQADLVKIFLTVTDILFN
EGFEHQSKLAQLTRLVETGQLDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQATYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAFYDYSGTMIDLTPADQEKIQLWEVVNQKEEVEQVATAIRQHVHQ
GARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEMSHHPLVHFVESLERLRRYRFRSEDLLNLLKSGLYASISQK
GLDLFESYILFVDMKGQAAFSRAFSVNGRADYDAEVIKEKRLVYDLNVLEPLRAKIMEPLNQLFKAGSQSGAALLEKFMA
FLEAIELPKNMEKISRNLSEVEQEKEEQVWKSFTHILENFHQIFGKEKLKMDDFLAILQAGMQASHYRTVPATVDVVNVK
SYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEKVNLVSASSSRFDLVSRENIKKNHAAMMSLLNSATEQLVIS
TPQIYNEGEDSLSPYIKILQKMGLKSEERGRIKTLSPQDIGHYKSLLSRLIESERPSLETEEWEGQRAFWTVLVRHLKKK
LESQSIEIPTITGDIASKQLSDETLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRLREQESIHPTAFQHGLFLHRI
FERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADARYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALV
FDLQNGKSVHVNGTIDRLDTLQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQELYKQAAMDILAGRFAINPY
TKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWMERMKGGQD

Nucleotide

• Length: 3267 bp

>NTDB_id=52540 T15_RS06345 WP_023370606.1 1253608..1256874(-) (rexB) [Streptococcus suis T15]
ATGAAATTAGTCTATACAGATATTCGCAATCCTCTGACGCAGTATTTAACGGATACCTCGGCAGAATTTGCTAAGGAAGG
CAAGCGAGTTTTTTACATTGCTCCAAACTCTCTATCCTTTGAAATGGAACGTAAAGTCTTGGAATACCTGCCTGAACAGG
CAACTTTTGATATTATCGTGACCCGTTTTGGGCAATTGGCCCGCTATTTGATGATTGATAGGAAAGAAGCAGGTCAACCG
CTGGATAATGTTGGTCTGGCCATGATTTTCTTTCGTGTTCTATCGCAATTTGAAGATGGCGACTTGAAAGTCTATGGTCG
TTTGCAGACAGATTTCGGTTTCATTAACCAGCTAGTTGCTTTATACAAAGAATTGCAACGGGCAAATATGTCTATTTTGG
ACTTGGAAGCCATGGAGTCACCAGATAAGCAGGCTGATTTGGTAAAGATTTTTCTGACTGTAACTGACATATTGTTCAAC
GAAGGCTTTGAGCATCAGTCTAAGTTAGCACAGTTGACTCGCTTGGTAGAAACTGGTCAGTTGGATGAGCAGTTGAAGAA
CATTGTGCTGGTGGTAGACGGATTTTCTCGTTTTTCGGCAGAAGAAGAAGCTTTAGTAAGTGCTTTAAATGAACGGGTGT
CGGAAATCCTGATTGGTGTATATGCCAGCAAGAAAGCTGTGCAAGCGACCTATGCGGAAGGCAATGTCTATCAAGCTAAC
GTTGACTTTTTACGTCAGTTATCAGCGCAGTTCCAGACCAAGGCTACTTATATTGGTCAAGAGCCAGTCTTGGACAGTAT
CGGTAAATTTTCAAAGAATATGGAAGCCTTTTATGACTACAGCGGGACCATGATAGACTTGACTCCAGCAGACCAAGAAA
AAATCCAGCTATGGGAAGTCGTTAACCAAAAAGAAGAGGTGGAGCAAGTTGCGACTGCAATTCGTCAGCATGTGCATCAA
GGGGCTCGCTATAAAGACATCTTGTTGCTCTTGGGTGATGTGGATAGTTACAAGTTGCAGATTGGCAAGATTTTTGACAA
GTATGATATTCCTTACTATTTCGGCAAGGCAGAGGAGATGAGTCATCATCCTCTGGTCCATTTTGTGGAGTCCTTGGAGC
GCTTGCGTCGCTATCGTTTCCGTTCGGAAGACCTGCTCAATCTCCTCAAATCTGGTTTGTACGCCAGCATTTCCCAAAAG
GGGCTGGACTTGTTTGAGTCCTACATCCTTTTTGTGGATATGAAGGGGCAGGCTGCTTTTTCGAGGGCTTTTTCGGTCAA
TGGCAGAGCAGACTATGATGCTGAAGTTATTAAGGAGAAAAGACTTGTCTATGATTTGAATGTTTTGGAACCCCTGCGTG
CTAAGATTATGGAGCCTTTGAACCAGTTGTTTAAGGCTGGATCACAATCTGGAGCTGCCTTGCTTGAGAAATTTATGGCA
TTTTTGGAGGCGATTGAGCTTCCTAAAAATATGGAAAAAATATCTCGAAATTTGAGTGAAGTAGAGCAAGAAAAAGAAGA
GCAGGTCTGGAAAAGTTTTACCCATATTCTAGAGAATTTTCATCAGATTTTCGGAAAAGAAAAGTTGAAAATGGATGATT
TTCTGGCTATTTTACAGGCTGGAATGCAGGCCAGCCACTATCGTACCGTTCCTGCAACAGTTGATGTGGTCAATGTCAAA
TCCTATGATTTGATCGAGCCGCACACTGCAAAGTATGTTTATGCTATCGGAATGGGTCAGTCAAATTTTCCAAAAGTTGC
CAAGAATACCAGTCTATTGACAGAAGAAGAGATGGAAAAAGTCAATCTTGTCTCGGCTAGTTCCTCACGTTTCGATTTGG
TCAGCCGAGAGAATATCAAGAAGAACCATGCTGCTATGATGTCTCTGCTTAATTCTGCGACGGAACAGTTAGTCATTTCT
ACTCCTCAGATTTATAACGAAGGCGAAGATAGTCTCTCCCCATATATCAAGATTCTCCAAAAAATGGGGTTGAAATCCGA
AGAACGTGGTCGGATTAAAACACTTAGTCCACAAGACATCGGTCACTACAAGAGTCTCTTATCCCGTTTGATTGAGTCGG
AAAGACCAAGCCTTGAAACAGAGGAGTGGGAAGGGCAGAGGGCCTTCTGGACAGTCTTGGTTCGCCATTTGAAGAAGAAA
TTGGAGTCGCAAAGCATTGAAATTCCGACCATTACTGGTGATATTGCTTCTAAACAACTTTCAGATGAAACCTTGGCTGC
TTTATATCCAGAGGATAAGCCGCTCAATCTTTCTGCATCCAGCTTGACCAATTTCTACAATAACCAATATCTTTACTTTG
TCCGTAATGTTCTTCGCCTGCGGGAACAGGAATCCATCCATCCGACTGCCTTTCAGCATGGTTTGTTCTTGCATCGGATT
TTTGAACGAGTGGTCATGGACCAATCTGAGCTAGATTTTGATCAAAAAGTGGACAAGGCAATTCTGCGTACGCGTGACGA
GGCAGAATTTGCTATGTTTTATAACCAGGATGCGGATGCTCGTTATACGGAGGAGGTGCTGGATAAGATTGCTCGTTCCA
GTGCGACTATTTTGCGGGATAATGATTTGGTTGAAATTGATGGCCAGGAAAAGAGTTTCCGTCAGGATAAGGCGCTGGTT
TTTGACCTTCAAAATGGCAAGAGTGTGCATGTAAATGGTACCATTGACCGCTTGGATACCTTACAAATCAATCAGGCTGT
CGGTGTTGTGGATTACAAGTCCAGCGACCAATCTTTTTCAGTTGGGGATTTTTATAATGGTCTCAAACCTCAGTTGGTGA
CCTACTTGGCAGCCTTACAAGAGCTGGATGAAACCAAGGATAAACCTGTTTTTGGGGCTATGTATTTGCATTTGCAGGAT
CCGATTATCAAATTAAAAGACACGAAGAATTTAGAACAGCTAGAAGGAGCTGCCAATACTAGCTTGGTTTACAAGGGGCT
TTTCTTGAAGGAGGAAAGTCTGGGGCTCAATCATTTTTATCAGACTCGTAACCAACTCTACACGGAAGATGAGTTTGCGG
TTTTATTGAACCACAACCAAGAACTATACAAACAAGCTGCCATGGACATTCTGGCTGGTCGCTTTGCTATTAACCCTTAT
ACCAAAGATGGGCGTTCGGTGGCAGGTGAGCAGCTGAAGGCAATCACTGGTTTTGAGGCGGATCGGCACATGGGCATGGC
ACGGCGGTTGGTCAAAGAGGCCAAGCGTCAAGATTGGATGGAACGAATGAAAGGAGGTCAGGACTAA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (757-1041)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	45.059	100	0.457