Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   JGR64_RS10620 Genome accession   NZ_CP067112
Coordinates   2304690..2305091 (-) Length   133 a.a.
NCBI ID   WP_182825315.1    Uniprot ID   A0A7X0QRE8
Organism   Luteimonas sp. MC1572     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2299690..2310091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JGR64_RS10605 (JGR64_10605) - 2301693..2303714 (-) 2022 WP_199373348.1 methyl-accepting chemotaxis protein -
  JGR64_RS10610 (JGR64_10610) - 2303746..2304273 (-) 528 WP_199374288.1 chemotaxis protein CheW -
  JGR64_RS10615 (JGR64_10615) - 2304305..2304670 (-) 366 WP_199373349.1 response regulator -
  JGR64_RS10620 (JGR64_10620) pilG 2304690..2305091 (-) 402 WP_182825315.1 twitching motility response regulator PilG Regulator
  JGR64_RS10625 (JGR64_10625) gshB 2305272..2306210 (+) 939 WP_199373350.1 glutathione synthase -
  JGR64_RS10630 (JGR64_10630) - 2306310..2307098 (+) 789 WP_199374290.1 energy transducer TonB -
  JGR64_RS10635 (JGR64_10635) lepB 2307129..2307755 (-) 627 WP_199373351.1 signal peptidase I -
  JGR64_RS10640 (JGR64_10640) tsaB 2307826..2308548 (-) 723 WP_199373352.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14978.24 Da        Isoelectric Point: 8.0328

>NTDB_id=525098 JGR64_RS10620 WP_182825315.1 2304690..2305091(-) (pilG) [Luteimonas sp. MC1572]
MTQDENRAGSLDGLRVMVIDDSKTIRRTAETLLRREGADVVTATDGFEALAKIADQRPQIIFVDIMMPRLDGYQTCALIK
NNQLFKHTPVIMLSSKDGLFDKARGRIVGSEQYVTKPFTREELLDAIRKHVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=525098 JGR64_RS10620 WP_182825315.1 2304690..2305091(-) (pilG) [Luteimonas sp. MC1572]
ATGACGCAGGACGAAAACCGCGCCGGCAGCCTTGATGGCCTGCGCGTGATGGTGATCGACGATTCGAAGACCATCCGCCG
CACGGCAGAGACACTGCTGCGCCGCGAGGGTGCGGACGTGGTGACTGCGACCGACGGGTTCGAGGCGCTGGCCAAGATCG
CCGACCAGCGGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGCCTGGACGGCTACCAGACCTGCGCACTGATCAAG
AACAACCAGCTTTTCAAGCACACGCCGGTGATCATGCTGTCTTCCAAGGACGGCCTGTTCGACAAGGCCCGAGGTCGCAT
CGTGGGCTCCGAGCAGTACGTCACCAAGCCTTTTACGCGCGAGGAACTCCTCGACGCCATCCGCAAACACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7X0QRE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.774

93.233

0.669
  vicR Streptococcus mutans UA159

41.026

87.97

0.361