Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BTF1_RS19195 | Genome accession | NC_018508 |
| Coordinates | 3785860..3786903 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013181.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis HD-789 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3780860..3791903
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BTF1_RS19150 (BTF1_19540) | - | 3781293..3781493 (-) | 201 | WP_000106083.1 | YqzE family protein | - |
| BTF1_RS19155 (BTF1_19545) | aroK | 3781532..3782029 (-) | 498 | WP_000836635.1 | shikimate kinase AroK | - |
| BTF1_RS19160 (BTF1_19550) | - | 3782145..3782795 (-) | 651 | WP_000183866.1 | 2OG-Fe(II) oxygenase | - |
| BTF1_RS19165 (BTF1_19555) | comGG | 3782970..3783341 (-) | 372 | WP_001214886.1 | competence type IV pilus minor pilin ComGG | - |
| BTF1_RS19170 (BTF1_19560) | comGF | 3783338..3783808 (-) | 471 | WP_000923110.1 | competence type IV pilus minor pilin ComGF | - |
| BTF1_RS19175 (BTF1_19565) | - | 3783778..3784080 (-) | 303 | WP_000829465.1 | hypothetical protein | - |
| BTF1_RS19180 (BTF1_19570) | comGD | 3784073..3784528 (-) | 456 | WP_003257968.1 | competence type IV pilus minor pilin ComGD | - |
| BTF1_RS19185 (BTF1_19575) | comGC | 3784525..3784824 (-) | 300 | WP_001178680.1 | competence type IV pilus major pilin ComGC | - |
| BTF1_RS19190 (BTF1_19580) | comGB | 3784836..3785873 (-) | 1038 | WP_003257965.1 | competence type IV pilus assembly protein ComGB | - |
| BTF1_RS19195 (BTF1_19585) | comGA | 3785860..3786903 (-) | 1044 | WP_001013181.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BTF1_RS19200 (BTF1_19590) | - | 3787109..3787804 (+) | 696 | WP_000434108.1 | helix-turn-helix domain-containing protein | - |
| BTF1_RS19205 (BTF1_19595) | - | 3787931..3788173 (+) | 243 | WP_000375619.1 | DUF2626 domain-containing protein | - |
| BTF1_RS19210 (BTF1_19600) | - | 3788281..3789675 (+) | 1395 | WP_001094344.1 | L-cystine transporter | - |
| BTF1_RS19215 (BTF1_19605) | - | 3789755..3790147 (-) | 393 | WP_000877906.1 | hypothetical protein | - |
| BTF1_RS19220 (BTF1_19610) | - | 3790235..3790450 (-) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| BTF1_RS19225 (BTF1_19615) | - | 3790704..3791015 (+) | 312 | WP_001093240.1 | hypothetical protein | - |
| BTF1_RS19230 (BTF1_19620) | - | 3791050..3791538 (-) | 489 | WP_000764263.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39168.55 Da Isoelectric Point: 8.7212
>NTDB_id=52489 BTF1_RS19195 WP_001013181.1 3785860..3786903(-) (comGA) [Bacillus thuringiensis HD-789]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEANGEC
VTYKHETLESSIRKGYALGFLEDDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEANGEC
VTYKHETLESSIRKGYALGFLEDDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=52489 BTF1_RS19195 WP_001013181.1 3785860..3786903(-) (comGA) [Bacillus thuringiensis HD-789]
ATGAATGGGATTGAAATTTTTGCTAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTTAAATTTTTAGCATCTATGGATATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTGTTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGTATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTTACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAATGTCCGTTTTGCAGAGGGAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTGCTATATGGGTATGAGTTAAAACAAGCGCTTAAAGAAGCGAATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGGTTTTTAGAAGATGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCTAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAATGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTTAAATTTTTAGCATCTATGGATATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTGTTTACTGGACCGACTGGTTCTGGGAAGACAACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGTATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTTACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAATGTCCGTTTTGCAGAGGGAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTGCTATATGGGTATGAGTTAAAACAAGCGCTTAAAGAAGCGAATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGGTTTTTAGAAGATGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.908 |
100 |
0.559 |
| pilB | Haemophilus influenzae 86-028NP |
39.752 |
92.795 |
0.369 |