Detailed information NTG0524809

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6134_RS20830
• Genome accession: NZ_CP082045
• Coordinates: 4286848..4287873 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS21324
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4281848..4292873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6134_RS20800 (K6134_20665)	zapB	4281932..4282177 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K6134_RS20805 (K6134_20670)	rraA	4282262..4282747 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K6134_RS20810 (K6134_20675)	menA	4282840..4283766 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K6134_RS20815 (K6134_20680)	hslU	4283833..4285164 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K6134_RS20820 (K6134_20685)	hslV	4285174..4285704 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
K6134_RS20825 (K6134_20690)	ftsN	4285797..4286756 (-)	960	WP_000068834.1	cell division protein FtsN	-
K6134_RS20830 (K6134_20695)	cytR	4286848..4287873 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K6134_RS20835 (K6134_20700)	priA	4288029..4290227 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
K6134_RS20840 (K6134_20705)	rpmE	4290430..4290642 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K6134_RS20845 (K6134_20710)	yiiX	4290703..4291311 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
K6134_RS20850 (K6134_20715)	metJ	4291371..4291688 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=524809 K6134_RS20830 WP_000644904.1 4286848..4287873(-) (cytR) [Escherichia coli strain MS21324]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=524809 K6134_RS20830 WP_000644904.1 4286848..4287873(-) (cytR) [Escherichia coli strain MS21324]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628