Detailed information NTG0524692

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: K5O18_RS00860
• Genome accession: NZ_CP081939
• Coordinates: 175626..178454 (-)
• Length: 942 a.a.
• NCBI ID: WP_194743012.1
• Uniprot ID: A0ABU7QHV7
• Organism: Avibacterium paragallinarum strain p4chr1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 170626..183454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5O18_RS00835 (K5O18_00835)	hutX	171794..172303 (+)	510	WP_046097755.1	heme utilization cystosolic carrier protein HutX	-
K5O18_RS00840 (K5O18_00840)	hutZ	172297..172815 (+)	519	WP_065230742.1	heme utilization protein HutZ	-
K5O18_RS00845 (K5O18_00845)	mreD	172842..173324 (-)	483	WP_035687802.1	rod shape-determining protein MreD	-
K5O18_RS00850 (K5O18_00850)	mreC	173324..174361 (-)	1038	WP_017805686.1	rod shape-determining protein MreC	-
K5O18_RS00855 (K5O18_00855)	-	174434..175480 (-)	1047	WP_017805687.1	rod shape-determining protein	-
K5O18_RS00860 (K5O18_00860)	uvrA	175626..178454 (-)	2829	WP_194743012.1	excinuclease ABC subunit UvrA	Machinery gene
K5O18_RS00865 (K5O18_00865)	ssb	178632..179147 (+)	516	WP_017805689.1	single-stranded DNA-binding protein	Machinery gene
K5O18_RS00870 (K5O18_00870)	-	179310..180383 (-)	1074	WP_110479356.1	alpha/beta hydrolase	-
K5O18_RS00875 (K5O18_00875)	-	180766..182091 (+)	1326	WP_222593715.1	ATP-binding protein	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104308.14 Da
• Isoelectric Point: 7.1276

>NTDB_id=524692 K5O18_RS00860 WP_194743012.1 175626..178454(-) (uvrA) [Avibacterium paragallinarum strain p4chr1]
MEKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPNHHIPLAAQTISQMVDKVLALPEESRMMLLAPVVKDRKG
EHIKILEHIAAQGYLRARIDGEICDLSDPPALELQKKHTIEVVVDRFKIRPDLATRLAESFETALELSGGTAIVANMDDP
QAEELLFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEKRVVQNPSISLANGAIKGWDRRNFYYYQM
LTSLAKHYGFNVESPFEELPKKIQHIILHGSGKEEIEFQYMNDRGDVVLRRHSFEGILNNMARRYKETESMAVREELAKH
ISTRPCKDCGGSRLRQEARNVFIGETNLPEVSEKSIGEAFNFVDRLTLSGQRAQIADKILKEIKERLQFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAILAADHIIDI
GPGAGVHGGNVVAQGTAQEIMQDPNSLTGKFLSGKEKIEIPQKRTALDKKKILKLKGASGNNLKNVNLEIPVGLFTCVTG
VSGSGKSTLINDTLFPLAQSALNRAENAQAAPYKSIDGLEFFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
ARARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTINQVLDMTVEEAREFF
DAIPQIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLDVLHRLRD
QGNTIVVIEHNLDVIKTADWIVDLGPEGGNGGGQIIATGTPEQVAEVKGSHTARFLKQILKK

Nucleotide

• Length: 2829 bp

>NTDB_id=524692 K5O18_RS00860 WP_194743012.1 175626..178454(-) (uvrA) [Avibacterium paragallinarum strain p4chr1]
ATGGAAAAAATAGAAGTAAGAGGGGCGAGAACCCACAATTTAAAAAATATTAATTTAACCATCCCCCGCGATAAATTGAT
TGTGATCACGGGGCTATCTGGTTCAGGCAAATCCTCTCTAGCCTTTGACACCCTATATGCTGAAGGACAACGCCGTTATG
TAGAATCCCTGTCGGCTTATGCACGTCAATTTTTATCGTTGATGGAAAAACCAGACGTGGATCATATTGAAGGTTTATCC
CCCGCAATTTCTATTGAGCAAAAATCAACATCTCACAACCCACGTTCTACAGTGGGAACAATCACGGAAATTCATGATTA
TTTGCGTTTATTATTTGCCCGTGTGGGGGAGCCTCGCTGCCCGAATCACCATATTCCTTTGGCAGCACAAACAATTAGCC
AAATGGTAGATAAAGTATTGGCATTACCTGAAGAAAGCCGAATGATGTTACTTGCCCCTGTAGTAAAAGATCGCAAAGGG
GAGCATATTAAGATTTTGGAACACATTGCGGCACAAGGCTATCTTCGTGCCAGAATCGACGGTGAAATTTGCGATCTATC
GGATCCCCCTGCATTAGAATTACAGAAAAAACATACAATCGAAGTAGTGGTAGATCGCTTTAAAATTCGTCCAGATCTTG
CCACGCGTTTAGCTGAATCTTTTGAAACAGCATTAGAGCTGTCTGGTGGTACCGCTATAGTGGCAAATATGGATGATCCA
CAAGCCGAAGAGCTGCTTTTTTCCGCCAATTTTGCCTGTCCGCATTGTGGTTATTCTGTGCCAGAACTTGAGCCTCGCTT
ATTCTCTTTTAATAACCCTGCAGGTGCTTGTCCAACTTGTGATGGTTTAGGTGTACAACAATATTTTGATGAAAAACGAG
TGGTTCAAAACCCAAGTATTTCTCTAGCTAACGGGGCGATTAAGGGTTGGGATCGACGTAATTTCTATTATTATCAGATG
CTCACCTCATTGGCAAAACATTATGGTTTTAATGTGGAAAGCCCATTCGAAGAATTACCAAAAAAAATTCAACACATTAT
TCTGCACGGCTCAGGCAAAGAAGAGATTGAATTCCAATATATGAATGATCGCGGTGATGTCGTGCTACGCCGTCATAGCT
TTGAGGGCATTCTCAATAATATGGCTCGCCGTTATAAAGAAACCGAATCTATGGCGGTGCGTGAAGAGTTAGCGAAACAT
ATCAGCACTCGCCCTTGTAAAGATTGCGGGGGGTCTCGCTTACGTCAAGAGGCTCGCAATGTATTTATTGGGGAAACAAA
TCTTCCCGAAGTTTCTGAAAAAAGTATTGGGGAAGCCTTTAATTTTGTAGATAGATTAACATTAAGCGGTCAACGTGCCC
AAATTGCCGACAAAATTTTGAAAGAAATCAAAGAGCGGTTGCAGTTTTTAGTCAATGTTGGCTTAAATTACCTCTCCCTT
TCCCGCTCCGCAGAAACCCTTTCTGGCGGTGAAGCACAACGTATTCGTCTTGCGAGCCAAATCGGGGCGGGTTTAGTGGG
GGTGATGTATGTACTTGATGAGCCTTCTATTGGCTTACATCAACGCGATAATGAGCGTTTGCTTAACACATTGATTCATC
TAAGAAACTTAGGAAATACAGTGATTGTGGTAGAACACGATGAAGATGCTATTCTTGCTGCGGATCATATTATTGATATT
GGACCAGGTGCGGGCGTACACGGCGGCAATGTTGTTGCTCAAGGCACTGCTCAAGAAATCATGCAAGATCCAAATTCTTT
GACGGGTAAATTTTTATCTGGAAAGGAAAAAATAGAAATTCCGCAAAAACGCACCGCACTTGATAAAAAGAAAATCTTAA
AACTTAAAGGGGCTTCGGGCAACAACTTAAAAAATGTCAATTTAGAAATCCCCGTTGGATTATTTACTTGCGTCACCGGC
GTATCTGGTTCGGGCAAATCCACATTAATTAACGACACTTTATTTCCTTTAGCACAAAGTGCATTAAACCGTGCTGAAAA
CGCCCAAGCCGCACCATACAAATCGATCGATGGACTCGAATTTTTTGACAAAGTGATTGATATTGACCAAAGCCCGATTG
GACGTACACCGCGTTCAAATCCTGCTACTTATACGGGATTATTCACCCCTATCCGCGAATTATTCGCTGGTGTACCAGAA
GCTCGAGCAAGAGGCTACAATCCCGGTCGATTTAGCTTTAACGTGCGAGGCGGACGCTGTGAAGCCTGCCAAGGAGATGG
GGTAATCAAAGTAGAAATGCACTTTTTACCTGATGTTTACGTCCCTTGCGATCAATGTAAAGGAAAACGTTACAATCGTG
AAACCTTAGAAATTCGTTACAAAGGCAAAACGATTAACCAAGTGTTGGATATGACAGTGGAAGAAGCTCGTGAGTTTTTT
GATGCTATCCCACAAATTGCTCGCAAATTGCAAACCTTAATGGATGTTGGGCTTTCTTATATCCGTTTAGGGCAATCTTC
CACCACACTTTCTGGTGGTGAAGCACAACGCGTAAAATTAGCCACCGAGCTGTCTAAACGAGATACGGGAAAAACATTGT
ATATTCTTGACGAGCCAACAACAGGTTTGCATTTTGCCGATATTAAACAACTGCTTGATGTCTTGCACCGCTTGCGTGAC
CAAGGTAATACGATTGTGGTGATTGAGCATAATTTAGATGTTATCAAAACTGCAGATTGGATTGTAGATCTTGGGCCTGA
AGGTGGTAATGGAGGCGGGCAAATCATTGCGACAGGCACGCCAGAACAAGTTGCAGAGGTTAAAGGTTCACATACAGCAC
GCTTCTTAAAGCAAATACTCAAAAAGTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-399)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.404	99.788	0.583
uvrA	Streptococcus pneumoniae TIGR4	58.404	99.788	0.583
uvrA	Streptococcus pneumoniae D39	58.404	99.788	0.583