Detailed information NTG0524686

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: K5O18_RS00200
• Genome accession: NZ_CP081939
• Coordinates: 42735..44078 (+)
• Length: 447 a.a.
• NCBI ID: WP_222593712.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain p4chr1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 37735..49078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5O18_RS00180 (K5O18_00180)	-	38984..40153 (+)	1170	WP_110479720.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
K5O18_RS00185 (K5O18_00185)	pilF/pilF2	40187..40729 (+)	543	WP_110479719.1	type IV pilus biogenesis/stability protein PilW	Machinery gene
K5O18_RS00190 (K5O18_00190)	dprA	40874..41974 (+)	1101	WP_110479718.1	DNA-processing protein DprA	Machinery gene
K5O18_RS00195 (K5O18_00195)	rsmD	41971..42579 (-)	609	WP_110479717.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
K5O18_RS00200 (K5O18_00200)	pilA	42735..44078 (+)	1344	WP_222593712.1	signal recognition particle-docking protein FtsY	Machinery gene
K5O18_RS00205 (K5O18_00205)	glpQ	44638..45732 (-)	1095	WP_110479715.1	glycerophosphodiester phosphodiesterase	-
K5O18_RS00210 (K5O18_00210)	glpT	45827..47272 (-)	1446	WP_017807318.1	glycerol-3-phosphate transporter	-

Sequence

Protein

• Length: 447 a.a.
• Molecular weight: 49237.46 Da
• Isoelectric Point: 4.3627

>NTDB_id=524686 K5O18_RS00200 WP_222593712.1 42735..44078(+) (pilA) [Avibacterium paragallinarum strain p4chr1]
MAEKIKKGGFWSWFGLGKKEEEAVEPSLLQENVEEINVSQTEIPSEQSAVENSQGFEQETETLTQAEISSEQSAVENSQD
FEQETETLTQAEISSEQSAVENPQGFEQETESLTQIEITPEQSEAENPQPAEKEKPSKGGFFSRLVKGLIRTKQNIGSGF
LSLFSGKKIDDDLFEELEEQLLIADIGMPTTTKIINNLTQHASRKQLKEADLLYQQLKAELADIINPVAQPLQIDSSKKP
YVILMVGVNGVGKTTTIGKLARQFQMQGKSVMLAAGDTFRAAAVEQLQVWGERNHIPVIAQNTGADSASVIYDAMQSAAA
RNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFHEAVGLTGISLTKLDGTAK
GGVIFAIADQFKLPIRYIGIGEKIEDLRPFQAEEFIEALFSKELETQ

Nucleotide

• Length: 1344 bp

>NTDB_id=524686 K5O18_RS00200 WP_222593712.1 42735..44078(+) (pilA) [Avibacterium paragallinarum strain p4chr1]
ATGGCAGAAAAAATTAAAAAAGGCGGATTTTGGTCTTGGTTTGGCTTAGGTAAAAAGGAAGAAGAAGCGGTAGAGCCTAG
TTTATTGCAAGAAAATGTGGAAGAAATCAACGTTTCACAAACAGAAATCCCCTCAGAACAAAGTGCGGTGGAAAATTCAC
AAGGTTTTGAGCAAGAAACGGAAACTCTAACGCAAGCTGAAATTTCCTCAGAGCAAAGTGCGGTAGAAAATTCGCAAGAT
TTTGAGCAAGAAACGGAAACTCTAACGCAAGCTGAAATTTCCTCAGAGCAAAGTGCGGTAGAAAATCCGCAAGGTTTTGA
GCAAGAAACGGAAAGCCTAACGCAAATCGAAATCACGCCAGAGCAAAGTGAAGCAGAAAATCCACAACCCGCTGAGAAAG
AAAAACCAAGCAAAGGGGGCTTTTTCAGTCGATTAGTGAAAGGGCTGATTCGTACCAAACAGAATATCGGTTCAGGCTTT
TTGAGTCTATTTTCAGGTAAGAAAATTGATGATGATTTGTTTGAAGAGCTGGAAGAACAGCTATTGATCGCCGATATTGG
AATGCCGACAACAACCAAGATTATCAATAATTTAACTCAACACGCCAGCCGCAAACAGCTAAAAGAGGCAGATTTGTTGT
ATCAACAGCTTAAAGCGGAGCTTGCAGATATTATTAACCCTGTCGCACAGCCGCTGCAAATTGATAGCAGCAAAAAGCCT
TATGTGATTTTGATGGTGGGCGTAAATGGCGTGGGCAAAACCACCACTATTGGCAAATTGGCTCGTCAATTCCAAATGCA
AGGCAAATCGGTGATGTTAGCCGCTGGGGATACTTTCCGTGCCGCCGCTGTAGAACAGCTACAAGTGTGGGGGGAACGCA
ATCATATTCCCGTTATTGCTCAAAACACGGGGGCGGATTCTGCTTCCGTGATTTATGACGCAATGCAATCAGCAGCGGCG
AGAAATATTGACATTTTAATCGCCGACACCGCAGGGCGTTTGCAAAATAAAAATAACTTAATGGACGAGCTGAAAAAAAT
CGTGCGAGTGATGAAAAAATACGATGAAACCGCACCGCACGAAATTATGCTGACCCTTGACGCGGGTACAGGGCAAAACG
CCATTAGCCAAGCGAAATTATTCCACGAAGCCGTAGGGCTAACGGGCATTAGCTTAACGAAGCTCGACGGCACAGCAAAA
GGCGGAGTGATTTTCGCCATCGCAGATCAATTTAAATTGCCGATTCGCTATATTGGTATCGGTGAAAAAATTGAAGATCT
ACGCCCATTCCAAGCGGAAGAATTTATTGAGGCTTTATTTAGTAAAGAATTGGAAACTCAATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (241-440)

• SRP54-type protein, helical bundle domain (SRP54_N) (157-221)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.75	96.644	0.423