Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   JHX84_RS04030 Genome accession   NZ_CP067043
Coordinates   801867..802265 (+) Length   132 a.a.
NCBI ID   WP_043866822.1    Uniprot ID   -
Organism   Bacillus velezensis strain 19573-3     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 796867..807265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHX84_RS04010 (JHX84_04010) - 799266..799628 (-) 363 WP_014304320.1 helix-turn-helix domain-containing protein -
  JHX84_RS04015 (JHX84_04015) hxlA 799860..800495 (+) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  JHX84_RS04020 (JHX84_04020) hxlB 800492..801049 (+) 558 WP_014304318.1 6-phospho-3-hexuloisomerase -
  JHX84_RS04025 (JHX84_04025) nucA/comI 801408..801845 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  JHX84_RS04030 (JHX84_04030) nin/comJ 801867..802265 (+) 399 WP_043866822.1 competence protein ComJ Regulator
  JHX84_RS04035 (JHX84_04035) - 802306..802525 (-) 220 Protein_783 family 1 glycosylhydrolase -
  JHX84_RS20095 - 802524..802802 (-) 279 WP_107890409.1 family 1 glycosylhydrolase -
  JHX84_RS04045 (JHX84_04045) - 802744..803019 (-) 276 WP_371745793.1 YckD family protein -
  JHX84_RS04050 (JHX84_04050) - 803136..803570 (-) 435 WP_003156592.1 RDD family protein -
  JHX84_RS04055 (JHX84_04055) - 803585..804721 (-) 1137 WP_003156594.1 zinc-dependent alcohol dehydrogenase -
  JHX84_RS04060 (JHX84_04060) - 804786..805988 (-) 1203 WP_069473143.1 GTP-binding protein -
  JHX84_RS19855 - 806102..806266 (+) 165 WP_370648487.1 molybdopterin dinucleotide binding domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15014.99 Da        Isoelectric Point: 4.6564

>NTDB_id=524618 JHX84_RS04030 WP_043866822.1 801867..802265(+) (nin/comJ) [Bacillus velezensis strain 19573-3]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=524618 JHX84_RS04030 WP_043866822.1 801867..802265(+) (nin/comJ) [Bacillus velezensis strain 19573-3]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGAAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.744

97.727

0.75