Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   JFY49_RS11650 Genome accession   NZ_CP067019
Coordinates   2360923..2365392 (-) Length   1489 a.a.
NCBI ID   WP_200223039.1    Uniprot ID   -
Organism   Acinetobacter sp. CS-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2355923..2370392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JFY49_RS11620 (JFY49_11620) - 2356303..2356686 (-) 384 WP_086195978.1 YbaN family protein -
  JFY49_RS11625 (JFY49_11625) - 2356783..2357679 (+) 897 WP_086195979.1 DUF1853 family protein -
  JFY49_RS11635 (JFY49_11635) - 2358968..2359117 (+) 150 WP_086195980.1 entericidin A/B family lipoprotein -
  JFY49_RS11640 (JFY49_11640) dapE 2359247..2360383 (+) 1137 WP_180174809.1 succinyl-diaminopimelate desuccinylase -
  JFY49_RS11645 (JFY49_11645) - 2360460..2360918 (-) 459 WP_086195982.1 hypothetical protein -
  JFY49_RS11650 (JFY49_11650) chpA 2360923..2365392 (-) 4470 WP_200223039.1 Hpt domain-containing protein Regulator
  JFY49_RS11655 (JFY49_11655) - 2365566..2367209 (-) 1644 Protein_2276 methyl-accepting chemotaxis protein -
  JFY49_RS11660 (JFY49_11660) - 2367386..2368476 (+) 1091 WP_107010211.1 IS4-like element ISAba33 family transposase -
  JFY49_RS11665 (JFY49_11665) - 2368495..2368827 (-) 333 Protein_2278 chemotaxis protein -
  JFY49_RS11670 (JFY49_11670) - 2368873..2369409 (-) 537 WP_086195985.1 chemotaxis protein CheW -
  JFY49_RS11675 (JFY49_11675) - 2369415..2369783 (-) 369 WP_086195986.1 response regulator -
  JFY49_RS11680 (JFY49_11680) pilG 2369807..2370190 (-) 384 WP_086195987.1 twitching motility response regulator PilG Regulator

Sequence


Protein


Download         Length: 1489 a.a.        Molecular weight: 167129.90 Da        Isoelectric Point: 4.2789

>NTDB_id=524477 JFY49_RS11650 WP_200223039.1 2360923..2365392(-) (chpA) [Acinetobacter sp. CS-2]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELSTLFTTWLENPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWAVEDTLNRVISGTVPLDSTVQRFAQTVFNIYQYKLYPIFKTVQNADIDLRPLVLLGQQIQQQVSLEPALEELLEL
SSTLTSVNSLTGLELQDQSFSEAAPEMAIETTATAASVAADDNNDIEETVAIFIEEAEEHLLTIDQFLKNEQEQYQDYNG
LIRALHTLRGSSSMAHIDQIFAASTKVENLFKTLLQEEIVSTSSQTALLIQYAEFVRDYLHTLRQGQTQKLDAIYATFNS
AWDDYGFSSAEVDEDVNPQGLVSKLVELNIDLLLDAEFEFEKRAKVEYPEYIQALSQQAQQLLDNTDNRAAMGIYQFTHE
LKSGYEALVLKPELLNIDYAYDLFGQAHQEFIHLFDTLAAGQRVILTEDIQKVLNDLAAFVQQDLEQFEVQEPNPETQAE
ASPAAASGIVDLAQISQKIGSDREHMHAADANRDFDEDLLDIFLEEAEELLGGIDQDLNTWSKDPSDTAALNNLMRYLHT
LKGGANMIQATHIGLIAHELESIYERVIRHQIEVNPQLISIIRLVQDDVSDRIQVIRDEQIDYSGAESIEILRNIQAIAQ
GSVAVSTAVAEVEVQAEPEVAAEIEELETATTLETEIEPEIQLETEVEAKVEAEAAAEVALATPDHVEEPDDSIRLIAEE
TFWEEAEEILESTDSLLKQWFEQRSDRSLLLQLQRAAHSLKGGARMVENEPVGAIAYQLETTFERFAVHQFNSNVYDLLL
QTTLAWLKQAIFEHDYSNFDSVKLSLESIEFVDVIAQLPKRVAESDTLSTAKVFEFVQGDGTEPPAMMGEWDTSNQQDNS
NEMIRISADLVEKMIDLSGENAINRSRIEMDLGQFSNTLNEMELAIKRLADQLRRMEGELESQIIAKHGDNSRYADFDPL
EMDQYSSLNQLSKSLAESASDLVDFKTTLSEKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFDRLLPRLQRIVHQTSSTL
NRPAELVVQNTEGELDRNILERLVTPFEHMLRNAIDHGLEDTHVRHELQKPEVGKIVLNISRQGTDVLVSFSDDGKGIDE
TKIKEKALSLGLIKADQSMDKQEILQLIFHPGFTTAKEVTQISGRGVGLDVVQSEIKALGGHISIDSELGKGTTFTIRVP
TTVAVSDALMVKSGDQQFAISLAQIDRIVRIAPSALEKYFNSKDDFFKIDNTSYKLRYLSEFVSNQPLPRLSNVAHSLPV
LLIKGNSGQTIALLVDQLIGSRAQIVVKPIGQQFSSVGAVAGATILGDGQVCLILDGQNIARQIQNTQRLKHVSDQREHS
RYSNTRRLIMIVDDSVTVRKVTSRLLERQGFDVVTAKDGIDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHHDVHQN
LPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLENVESLLEISQG

Nucleotide


Download         Length: 4470 bp        

>NTDB_id=524477 JFY49_RS11650 WP_200223039.1 2360923..2365392(-) (chpA) [Acinetobacter sp. CS-2]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTACGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATAGAAGAAATCTTCGTTGAATTAAGTACTTTATTTACAACTTGGTTGGAAAATCCGAATG
ACCAAGAAACTTTAACGACCATTCGCCGTCATTTTCATACCCTTAAAGGTTCTGGCCGTATGGTTGGAGCAAAATCTGCG
GGTGAGTTGGCATGGGCGGTTGAAGATACTTTAAATCGGGTTATTTCCGGCACAGTACCTTTGGACAGCACAGTTCAACG
ATTTGCCCAAACTGTATTTAATATTTATCAATACAAGTTATACCCAATTTTTAAAACTGTTCAAAATGCTGATATCGACT
TAAGACCTTTAGTATTATTGGGGCAGCAAATTCAGCAGCAGGTCAGTTTAGAACCTGCACTAGAAGAATTGCTTGAACTG
TCTAGCACACTGACCAGTGTCAATAGTCTTACTGGTCTGGAATTGCAGGATCAATCATTTAGTGAAGCAGCGCCTGAAAT
GGCAATCGAAACTACTGCTACAGCAGCGTCAGTCGCAGCAGACGACAACAATGATATTGAAGAAACGGTCGCGATCTTTA
TTGAAGAAGCAGAAGAACATCTGCTCACGATTGACCAGTTCCTGAAAAATGAACAGGAACAATATCAGGATTATAATGGC
CTGATCCGTGCCTTGCATACCTTGCGTGGCAGCTCTTCTATGGCACATATTGATCAGATTTTTGCAGCCAGTACCAAGGT
TGAAAACTTATTTAAAACACTTTTACAAGAAGAAATTGTCTCTACCTCCAGCCAGACTGCGTTGCTAATTCAATATGCTG
AATTTGTCCGTGATTATTTACATACTTTAAGACAGGGTCAGACTCAGAAACTTGATGCGATATATGCCACCTTTAATTCG
GCATGGGACGACTATGGTTTCAGTTCTGCAGAAGTGGATGAGGACGTTAATCCGCAAGGTCTGGTGTCCAAACTGGTCGA
ATTGAATATTGATTTACTTCTGGATGCCGAATTCGAATTTGAAAAACGTGCCAAAGTAGAATATCCGGAATACATTCAGG
CCTTAAGCCAGCAGGCACAGCAATTATTGGACAATACTGATAATCGTGCTGCGATGGGCATCTATCAATTTACCCATGAA
TTGAAGTCTGGCTATGAAGCTCTGGTATTAAAACCGGAACTGCTCAATATCGACTATGCATATGATCTGTTTGGGCAGGC
ACATCAAGAGTTCATTCATCTGTTTGATACACTGGCGGCAGGTCAGCGCGTTATTTTAACGGAAGATATCCAGAAAGTTC
TGAATGATCTGGCAGCCTTTGTTCAGCAGGATCTTGAACAGTTCGAAGTTCAGGAACCGAATCCTGAAACTCAAGCTGAA
GCCTCACCAGCTGCTGCTTCAGGTATTGTAGATCTGGCACAGATTTCACAAAAAATTGGTTCAGACCGCGAACACATGCA
TGCTGCTGATGCAAATCGTGATTTTGATGAAGATTTGTTGGATATCTTCCTGGAAGAAGCAGAAGAATTACTGGGCGGGA
TCGATCAAGACTTGAATACCTGGTCGAAAGATCCGTCCGATACTGCAGCACTGAATAATTTAATGCGTTATTTGCATACC
CTTAAAGGGGGTGCCAATATGATTCAGGCGACTCATATTGGCTTAATTGCGCATGAATTGGAAAGCATTTATGAACGCGT
GATCCGTCATCAAATTGAGGTCAATCCACAACTCATCAGTATTATTCGCTTAGTACAAGATGATGTATCAGACCGTATTC
AAGTCATTCGCGATGAGCAGATTGATTATTCTGGTGCTGAATCGATTGAAATTTTGCGTAATATTCAGGCGATCGCTCAA
GGTAGTGTGGCTGTAAGCACCGCAGTTGCGGAAGTCGAAGTTCAGGCTGAACCTGAAGTTGCAGCTGAAATTGAAGAACT
TGAAACTGCAACGACATTAGAAACAGAAATTGAACCTGAGATTCAGCTTGAAACTGAAGTGGAAGCTAAAGTCGAAGCTG
AAGCAGCTGCTGAAGTTGCCTTGGCAACTCCAGACCATGTTGAAGAGCCAGATGACAGTATCCGTTTAATTGCAGAAGAA
ACCTTCTGGGAAGAAGCAGAAGAAATTCTGGAGTCTACAGATAGCCTGTTGAAACAGTGGTTTGAGCAGCGTAGTGACCG
TAGCTTGCTGCTTCAATTACAGCGTGCAGCCCACAGTTTGAAAGGTGGCGCACGTATGGTGGAAAATGAACCGGTAGGGG
CAATTGCTTACCAGCTGGAAACCACCTTCGAACGCTTTGCGGTGCATCAGTTCAACTCCAATGTTTATGACCTGTTATTG
CAAACGACTTTGGCATGGTTAAAGCAGGCCATTTTCGAGCATGATTACAGTAATTTTGACAGCGTCAAATTAAGTTTAGA
GTCGATTGAATTTGTTGATGTCATTGCGCAGTTACCTAAGCGCGTGGCCGAATCCGATACGCTGTCTACGGCTAAAGTCT
TTGAATTTGTTCAGGGTGATGGTACCGAACCTCCAGCAATGATGGGTGAGTGGGATACAAGTAATCAACAGGACAACAGC
AATGAAATGATCCGTATTTCTGCCGATCTGGTCGAGAAAATGATCGACTTGTCTGGTGAAAATGCGATTAACCGTTCACG
TATTGAAATGGACTTGGGACAGTTTAGTAATACCCTGAACGAAATGGAACTGGCAATCAAGCGTCTGGCTGACCAGTTAC
GTCGAATGGAAGGTGAGCTCGAGTCTCAAATTATTGCCAAACATGGTGATAATTCACGTTATGCCGATTTTGATCCCCTG
GAGATGGACCAATATTCATCATTAAACCAGTTGTCAAAATCGCTGGCGGAATCTGCATCTGACTTGGTCGATTTCAAGAC
GACCCTGTCAGAAAAGATTCGTGATACGGAAGGTTTACTGTTACAACAATCCCGTATTCAAGCCGAGATTCAAGAAAGCC
TGATGCGTACCCGTCTGGTACCATTTGATCGTTTATTGCCACGGTTACAACGGATTGTGCATCAAACCTCATCGACCCTG
AACCGTCCGGCCGAGCTGGTGGTGCAAAACACCGAAGGTGAATTGGACCGTAACATTCTAGAGCGTCTGGTTACACCGTT
CGAGCACATGCTGCGTAATGCGATTGACCATGGTCTGGAAGACACTCACGTACGACATGAGTTACAAAAGCCTGAAGTCG
GGAAAATTGTTCTCAATATTAGCCGTCAAGGTACAGATGTACTGGTGTCATTCAGTGATGACGGTAAAGGGATTGATGAA
ACAAAAATTAAAGAAAAAGCACTCAGCTTGGGTTTAATTAAAGCCGATCAATCCATGGATAAGCAGGAAATCCTGCAATT
AATTTTCCATCCTGGATTTACTACTGCCAAAGAAGTGACCCAAATTTCCGGACGCGGTGTAGGTCTGGACGTGGTGCAAA
GCGAAATTAAGGCGCTGGGCGGGCATATTTCCATCGATTCTGAATTGGGTAAAGGGACCACCTTTACCATTCGCGTACCA
ACTACGGTGGCGGTGAGTGACGCCTTGATGGTTAAATCAGGCGACCAGCAGTTTGCGATTTCACTGGCACAAATTGACCG
TATTGTACGTATTGCACCATCAGCACTGGAAAAATATTTCAACAGTAAAGACGACTTCTTTAAAATTGATAACACCAGTT
ACAAACTGCGTTATTTATCCGAATTTGTGTCCAATCAGCCTTTACCACGTTTAAGTAATGTTGCCCATTCTTTACCTGTA
TTGCTGATTAAAGGCAATAGTGGTCAAACTATTGCACTACTTGTGGATCAGCTGATTGGTTCGCGTGCACAAATTGTGGT
GAAACCGATCGGTCAGCAATTCTCAAGTGTTGGCGCTGTTGCCGGAGCGACTATTCTAGGTGATGGTCAAGTCTGTCTGA
TTCTGGATGGTCAGAATATTGCCCGACAAATTCAGAACACCCAACGTCTTAAACATGTGTCTGATCAACGTGAGCATTCG
CGTTACAGTAATACACGCCGCCTGATCATGATTGTGGATGACTCGGTGACAGTACGTAAGGTGACCTCACGTTTACTTGA
ACGTCAAGGCTTTGATGTGGTGACGGCCAAAGATGGTATTGATGCCATGGAGCAGCTGGAAAATGTCAAACCAGACTTGA
TGTTGCTGGATATTGAAATGCCGCGCATGGACGGTTTTGAAGTCACGAATCTGGTTCGTCACCATGACGTGCATCAAAAC
TTGCCTATTATCATGATTACGTCAAGAACAGGCGAGAAGCACCGTGAACGTGCATTCAGTCTTGGGGTAACGCACTATAT
GGGTAAACCGTTCCAGGAAGCGGAATTGCTGGAAAATGTGGAAAGTTTGTTAGAAATCAGTCAGGGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.898

100

0.631