Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | I6I26_RS06270 | Genome accession | NZ_CP067014 |
| Coordinates | 1266813..1267787 (+) | Length | 324 a.a. |
| NCBI ID | WP_126568109.1 | Uniprot ID | - |
| Organism | Staphylococcus pasteuri strain FDAARGOS_1069 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1261813..1272787
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I26_RS06235 (I6I26_06235) | rpmG | 1262247..1262396 (+) | 150 | WP_017636259.1 | 50S ribosomal protein L33 | - |
| I6I26_RS06240 (I6I26_06240) | - | 1262635..1263189 (+) | 555 | WP_029055745.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| I6I26_RS06245 (I6I26_06245) | - | 1263186..1264640 (+) | 1455 | WP_029055746.1 | rhomboid family intramembrane serine protease | - |
| I6I26_RS06250 (I6I26_06250) | - | 1264630..1264833 (+) | 204 | WP_017636256.1 | YqgQ family protein | - |
| I6I26_RS06255 (I6I26_06255) | - | 1264830..1265816 (+) | 987 | WP_017636255.1 | ROK family glucokinase | - |
| I6I26_RS06260 (I6I26_06260) | - | 1265816..1266139 (+) | 324 | WP_017636254.1 | MTH1187 family thiamine-binding protein | - |
| I6I26_RS06265 (I6I26_06265) | - | 1266143..1266766 (+) | 624 | WP_017636253.1 | MBL fold metallo-hydrolase | - |
| I6I26_RS06270 (I6I26_06270) | comGA | 1266813..1267787 (+) | 975 | WP_126568109.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6I26_RS06275 (I6I26_06275) | - | 1267759..1268649 (+) | 891 | WP_126568111.1 | type II secretion system F family protein | - |
| I6I26_RS06280 (I6I26_06280) | comGC | 1268673..1268984 (+) | 312 | WP_029055749.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6I26_RS06285 (I6I26_06285) | comGD | 1268974..1269411 (+) | 438 | WP_046466732.1 | competence type IV pilus minor pilin ComGD | - |
| I6I26_RS06290 (I6I26_06290) | - | 1269458..1269691 (+) | 234 | WP_200271262.1 | hypothetical protein | - |
| I6I26_RS06295 (I6I26_06295) | - | 1270265..1270783 (+) | 519 | WP_182725463.1 | shikimate kinase | - |
| I6I26_RS06300 (I6I26_06300) | gcvT | 1270955..1272046 (+) | 1092 | WP_126567392.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37306.55 Da Isoelectric Point: 9.3944
>NTDB_id=524418 I6I26_RS06270 WP_126568109.1 1266813..1267787(+) (comGA) [Staphylococcus pasteuri strain FDAARGOS_1069]
MKILFQEIINKGIAYKASDIHFIPMEHYVHIKFRVNDTLTPYETLDINIYRKLLVFMKFQAGLDVSTQQIAQSGRYTYKL
RSVYYLRISTLPLSIGCESRVIRIVPQYFQSKKETYEFKDFKHFMNKKQGLLLFTGPTGSGKSTLMYQMVMYAQKELNLN
VISIEDPVEQILKGITQISVNNKAGITYASSFKAILRCDPDVILIGEIRDAEIAKYVFQASLSGHLVLSTLHANDCRGAL
LRLLEMGVTVQELSQAINLISNQRLITTSHNHRQLVCELMFKNQINYFFEHNQTMPKSFKRLASKLDDMTKEGIICETIV
DKYI
MKILFQEIINKGIAYKASDIHFIPMEHYVHIKFRVNDTLTPYETLDINIYRKLLVFMKFQAGLDVSTQQIAQSGRYTYKL
RSVYYLRISTLPLSIGCESRVIRIVPQYFQSKKETYEFKDFKHFMNKKQGLLLFTGPTGSGKSTLMYQMVMYAQKELNLN
VISIEDPVEQILKGITQISVNNKAGITYASSFKAILRCDPDVILIGEIRDAEIAKYVFQASLSGHLVLSTLHANDCRGAL
LRLLEMGVTVQELSQAINLISNQRLITTSHNHRQLVCELMFKNQINYFFEHNQTMPKSFKRLASKLDDMTKEGIICETIV
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=524418 I6I26_RS06270 WP_126568109.1 1266813..1267787(+) (comGA) [Staphylococcus pasteuri strain FDAARGOS_1069]
ATGAAGATTCTATTTCAAGAAATAATTAATAAAGGAATTGCATATAAAGCAAGTGATATACACTTTATTCCTATGGAGCA
TTATGTTCATATTAAATTTAGAGTAAATGATACATTAACACCTTATGAAACACTTGATATTAATATATATCGTAAGTTAT
TGGTGTTTATGAAATTCCAAGCTGGTTTAGATGTTTCTACACAACAAATCGCTCAAAGTGGCCGCTATACATATAAATTA
AGGTCAGTTTATTACTTACGTATTTCAACCCTTCCTTTATCAATTGGATGTGAAAGTCGTGTTATAAGAATTGTGCCTCA
ATATTTTCAAAGTAAAAAGGAAACATACGAGTTTAAAGATTTTAAACATTTTATGAATAAGAAGCAAGGTTTATTGCTTT
TTACTGGTCCTACAGGTTCAGGAAAAAGTACATTAATGTATCAAATGGTTATGTATGCACAAAAAGAGTTAAACCTAAAT
GTTATTTCTATTGAAGATCCAGTTGAACAAATTTTAAAAGGTATTACTCAAATTTCTGTTAATAACAAAGCAGGTATTAC
TTACGCTAGTTCATTTAAAGCAATTTTAAGATGTGATCCAGACGTTATTTTAATCGGAGAAATTCGTGATGCCGAAATCG
CTAAATATGTCTTTCAAGCTAGTCTAAGTGGTCATTTGGTATTAAGTACATTACACGCCAATGATTGTAGAGGGGCTTTA
CTTAGATTATTAGAAATGGGAGTAACAGTTCAAGAATTATCTCAAGCTATAAATTTAATTTCCAATCAACGATTAATTAC
AACATCACATAATCACAGACAATTAGTGTGTGAACTAATGTTTAAAAATCAAATTAATTACTTTTTTGAACATAACCAAA
CGATGCCAAAATCTTTTAAACGATTAGCATCAAAATTAGATGATATGACAAAAGAAGGTATTATATGTGAAACTATTGTT
GATAAATATATTTAA
ATGAAGATTCTATTTCAAGAAATAATTAATAAAGGAATTGCATATAAAGCAAGTGATATACACTTTATTCCTATGGAGCA
TTATGTTCATATTAAATTTAGAGTAAATGATACATTAACACCTTATGAAACACTTGATATTAATATATATCGTAAGTTAT
TGGTGTTTATGAAATTCCAAGCTGGTTTAGATGTTTCTACACAACAAATCGCTCAAAGTGGCCGCTATACATATAAATTA
AGGTCAGTTTATTACTTACGTATTTCAACCCTTCCTTTATCAATTGGATGTGAAAGTCGTGTTATAAGAATTGTGCCTCA
ATATTTTCAAAGTAAAAAGGAAACATACGAGTTTAAAGATTTTAAACATTTTATGAATAAGAAGCAAGGTTTATTGCTTT
TTACTGGTCCTACAGGTTCAGGAAAAAGTACATTAATGTATCAAATGGTTATGTATGCACAAAAAGAGTTAAACCTAAAT
GTTATTTCTATTGAAGATCCAGTTGAACAAATTTTAAAAGGTATTACTCAAATTTCTGTTAATAACAAAGCAGGTATTAC
TTACGCTAGTTCATTTAAAGCAATTTTAAGATGTGATCCAGACGTTATTTTAATCGGAGAAATTCGTGATGCCGAAATCG
CTAAATATGTCTTTCAAGCTAGTCTAAGTGGTCATTTGGTATTAAGTACATTACACGCCAATGATTGTAGAGGGGCTTTA
CTTAGATTATTAGAAATGGGAGTAACAGTTCAAGAATTATCTCAAGCTATAAATTTAATTTCCAATCAACGATTAATTAC
AACATCACATAATCACAGACAATTAGTGTGTGAACTAATGTTTAAAAATCAAATTAATTACTTTTTTGAACATAACCAAA
CGATGCCAAAATCTTTTAAACGATTAGCATCAAAATTAGATGATATGACAAAAGAAGGTATTATATGTGAAACTATTGTT
GATAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
72.222 |
100 |
0.722 |
| comGA | Staphylococcus aureus N315 |
72.222 |
100 |
0.722 |