Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   JCR30_RS09565 Genome accession   NZ_CP067008
Coordinates   1896132..1896908 (+) Length   258 a.a.
NCBI ID   WP_168681591.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain iGAS426     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1891132..1901908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JCR30_RS09545 (JCR30_09545) - 1892615..1893713 (-) 1099 Protein_1834 IS30 family transposase -
  JCR30_RS09555 (JCR30_09555) rlmH 1894129..1894608 (-) 480 WP_011889262.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JCR30_RS09560 (JCR30_09560) htrA 1894820..1896043 (+) 1224 WP_002981947.1 trypsin-like peptidase domain-containing protein Regulator
  JCR30_RS09565 (JCR30_09565) spo0J 1896132..1896908 (+) 777 WP_168681591.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29041.86 Da        Isoelectric Point: 10.2588

>NTDB_id=524253 JCR30_RS09565 WP_168681591.1 1896132..1896908(+) (spo0J) [Streptococcus pyogenes strain iGAS426]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKIPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=524253 JCR30_RS09565 WP_168681591.1 1896132..1896908(+) (spo0J) [Streptococcus pyogenes strain iGAS426]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAATTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTACTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(148-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.144

99.612

0.589