Detailed information NTG0524252

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K5O11_RS22160
• Genome accession: NZ_CP081881
• Coordinates: 4641831..4642856 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WW2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4636831..4647856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5O11_RS22140 (K5O11_22135)	metJ	4638016..4638333 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K5O11_RS22145 (K5O11_22140)	yiiX	4638393..4639001 (+)	609	WP_000702307.1	YiiX family permuted papain-like enzyme	-
K5O11_RS22150 (K5O11_22145)	rpmE	4639062..4639274 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K5O11_RS22155 (K5O11_22150)	priA	4639477..4641675 (+)	2199	WP_001361702.1	primosomal protein N'	Machinery gene
K5O11_RS22160 (K5O11_22155)	cytR	4641831..4642856 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K5O11_RS22165 (K5O11_22160)	ftsN	4642948..4643907 (+)	960	WP_000068841.1	cell division protein FtsN	-
K5O11_RS22170 (K5O11_22165)	hslV	4644000..4644530 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K5O11_RS22175 (K5O11_22170)	hslU	4644540..4645871 (+)	1332	WP_001293340.1	HslU--HslV peptidase ATPase subunit	-
K5O11_RS22180 (K5O11_22175)	menA	4645938..4646864 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K5O11_RS22185 (K5O11_22180)	rraA	4646957..4647442 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=524252 K5O11_RS22160 WP_000644904.1 4641831..4642856(+) (cytR) [Escherichia coli strain WW2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=524252 K5O11_RS22160 WP_000644904.1 4641831..4642856(+) (cytR) [Escherichia coli strain WW2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACTATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGATTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628