Detailed information NTG0052312

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MRBBS_RS03465
• Genome accession: NC_018268
• Coordinates: 770930..772303 (-)
• Length: 457 a.a.
• NCBI ID: WP_014870034.1
• Uniprot ID: M1F6W7
• Organism: Marinobacter sp. BSs20148
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 765930..777303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRBBS_RS03455	-	769820..770242 (+)	423	WP_041635056.1	type IV pilin protein	-
MRBBS_RS03460 (MRBBS_0732)	-	770243..770818 (-)	576	WP_319795902.1	GspH/FimT family pseudopilin	-
MRBBS_RS03465 (MRBBS_0733)	pilR	770930..772303 (-)	1374	WP_014870034.1	sigma-54-dependent transcriptional regulator	Regulator
MRBBS_RS03470 (MRBBS_0734)	-	772312..773982 (-)	1671	WP_014870035.1	sensor histidine kinase	-
MRBBS_RS03475 (MRBBS_0735)	-	774136..775800 (+)	1665	WP_014870036.1	NAD+ synthase	-
MRBBS_RS03480 (MRBBS_0736)	-	775856..776686 (-)	831	WP_041635057.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49877.17 Da
• Isoelectric Point: 5.5231

>NTDB_id=52312 MRBBS_RS03465 WP_014870034.1 770930..772303(-) (pilR) [Marinobacter sp. BSs20148]
MTKLTALIVDDEPDIRDLLEITLNRMGLKTFTAGTLAGGIAGMQKHTPNVCLTDMNLPDGKGIELVQWIQQHAPNTPVAV
ITAYGSMDTAIESLKAGAFDFVSKPVELPRLRELVNTALKLAQNPGPTPEDNSDPGLLLGNSAQIQTLRNQARKLARSQA
PVFIQGESGSGKELVARTIHQQGPRCDGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVDNKAGLFQSANGGTLFLDEIA
DLPLPMQVKLLRAIQEKAVRPVGDSHEVPVDIRVLSATHKDLPGLVQNGLFRQDLFYRINVIEIRVPPLRERSGDIALLA
RHILQRIAREYECAPIALTDSAVDYLKGYHFPGNVRELENILERAFTLCDGDVIDNGNLQLGSSCSSMDSPLLAPAAESM
TELSEQGLDLEEYLESIERKAIEQALEATRWNKTAAAKKLGISFRALRYKLKKLGLE

Nucleotide

• Length: 1374 bp

>NTDB_id=52312 MRBBS_RS03465 WP_014870034.1 770930..772303(-) (pilR) [Marinobacter sp. BSs20148]
ATGACCAAACTAACCGCGCTGATCGTAGACGACGAACCCGACATCCGTGACCTGTTAGAGATCACCCTCAACCGTATGGG
TCTGAAAACGTTCACCGCGGGCACTCTGGCAGGGGGGATCGCAGGCATGCAAAAGCACACGCCAAATGTGTGCCTGACCG
ATATGAACCTGCCAGATGGCAAAGGCATAGAGCTGGTGCAATGGATTCAGCAGCATGCGCCCAACACGCCAGTCGCCGTT
ATAACCGCCTACGGCAGTATGGACACCGCTATTGAGTCCTTGAAAGCAGGTGCTTTTGATTTTGTGTCAAAGCCCGTTGA
GCTACCGCGGCTGCGGGAACTGGTCAACACCGCCCTGAAACTGGCCCAGAACCCAGGGCCTACGCCAGAAGACAATAGTG
ACCCGGGTTTGCTGCTGGGTAATTCTGCCCAGATTCAAACCTTACGCAATCAGGCCCGAAAACTGGCCCGCAGCCAGGCG
CCGGTCTTTATTCAAGGCGAATCCGGCAGCGGTAAAGAGCTGGTCGCGCGCACCATTCACCAGCAAGGCCCCAGATGTGA
TGGGCCGTTCATAGCCGTGAACTGCGGCGCCATTCCATCTGAATTGATGGAAAGCGAGTTTTTTGGCCACAAAAAAGGCA
GTTTTACCGGAGCCGTCGATAACAAAGCAGGCCTGTTTCAAAGCGCCAACGGCGGTACCCTGTTTCTGGATGAAATTGCC
GATTTACCGCTGCCCATGCAAGTAAAGCTGCTGCGGGCCATTCAGGAAAAAGCCGTACGCCCGGTGGGCGACAGCCACGA
GGTACCTGTTGATATCCGCGTACTTAGCGCAACTCATAAAGACCTTCCGGGGCTGGTGCAAAATGGCCTGTTCCGACAGG
ACCTGTTCTATCGCATTAACGTGATTGAAATTCGCGTGCCGCCCCTGCGTGAACGCAGCGGCGACATAGCGCTGCTTGCC
AGGCACATCCTGCAGCGCATCGCCCGCGAATACGAATGCGCTCCCATTGCTCTTACCGACTCCGCCGTCGACTATTTAAA
GGGCTACCATTTCCCGGGCAATGTGCGTGAACTTGAAAACATACTGGAGCGGGCGTTTACCCTTTGCGACGGTGACGTTA
TTGACAACGGCAACCTTCAGCTTGGTAGCTCTTGTAGCAGCATGGATTCGCCTTTGCTGGCACCTGCAGCTGAGTCAATG
ACAGAACTGTCAGAGCAAGGCCTGGACCTGGAGGAATATCTTGAGAGCATAGAGCGCAAGGCTATTGAGCAAGCGTTGGA
AGCAACGCGTTGGAATAAAACAGCGGCGGCGAAAAAGTTGGGGATTAGTTTTCGGGCGCTGCGGTATAAGTTGAAGAAGT
TGGGGTTGGAGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

3D structure

• AlphaFold DB: M1F6W7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.092	100	0.624
pilR	Acinetobacter baumannii strain A118	53.132	100	0.538