Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   K4756_RS15715 Genome accession   NZ_CP081458
Coordinates   3035632..3036492 (-) Length   286 a.a.
NCBI ID   WP_015483633.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ps4060     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3030632..3041492
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K4756_RS15680 (K4756_15590) mrpE 3030863..3031339 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  K4756_RS15685 (K4756_15595) mrpF 3031339..3031623 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  K4756_RS15690 (K4756_15600) mnhG 3031607..3031981 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  K4756_RS15695 (K4756_15605) yuxO 3032020..3032400 (-) 381 WP_015483631.1 hotdog fold thioesterase -
  K4756_RS15700 (K4756_15610) comA 3032418..3033062 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  K4756_RS15705 (K4756_15615) comP 3033143..3035443 (-) 2301 WP_046340263.1 histidine kinase Regulator
  K4756_RS15710 (K4756_15620) comX 3035455..3035619 (-) 165 WP_015384519.1 competence pheromone ComX -
  K4756_RS15715 (K4756_15625) comQ 3035632..3036492 (-) 861 WP_015483633.1 polyprenyl synthetase family protein Regulator
  K4756_RS15720 (K4756_15630) degQ 3036677..3036817 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  K4756_RS15725 - 3037039..3037101 (+) 63 Protein_3039 hypothetical protein -
  K4756_RS15730 (K4756_15635) - 3037279..3037647 (+) 369 WP_015483634.1 hypothetical protein -
  K4756_RS15735 (K4756_15640) pdeH 3037623..3038852 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  K4756_RS15740 (K4756_15645) pncB 3038989..3040461 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  K4756_RS15745 (K4756_15650) pncA 3040477..3041028 (-) 552 WP_014477836.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32511.47 Da        Isoelectric Point: 4.7414

>NTDB_id=522530 K4756_RS15715 WP_015483633.1 3035632..3036492(-) (comQ) [Bacillus subtilis subsp. subtilis strain ps4060]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFTQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYQGLYYLNNDFIQKKNTLAYLYLNKRFNAASAEILSWYENAELFLSLNPKQIK
EKLTEAGVVQYLLVMKHLSLQKLKKEIARLELQENKIKKLITGIIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=522530 K4756_RS15715 WP_015483633.1 3035632..3036492(-) (comQ) [Bacillus subtilis subsp. subtilis strain ps4060]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTACACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGTTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTACCAAGGTTTATATTATTTAAATAACGATTTTATTCAGAAGAAAAACACATTGGCATACTTATACTTAAATAAACGTT
TTAATGCAGCTTCTGCAGAAATCTTGAGTTGGTATGAAAATGCTGAGTTGTTCTTATCATTGAATCCCAAACAAATAAAA
GAAAAATTAACTGAGGCAGGCGTAGTGCAATATTTACTTGTAATGAAACACTTGTCATTACAAAAACTAAAGAAAGAAAT
TGCTAGATTAGAATTGCAAGAGAATAAAATAAAAAAATTAATAACAGGAATCATAAAATAA

Domains


Predicted by InterProScan.

(39-194)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.423

99.301

0.451