Detailed information NTG0522075

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: JGZ36_RS07175
• Genome accession: NZ_CP066718
• Coordinates: 1465070..1465594 (+)
• Length: 174 a.a.
• NCBI ID: WP_256726570.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain DG064
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1460070..1470594

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JGZ36_RS07135 (JGZ36_07135)	-	1460314..1460661 (-)	348	WP_015729174.1	hypothetical protein	-
JGZ36_RS07140 (JGZ36_07140)	-	1460658..1460810 (-)	153	WP_015729173.1	ribbon-helix-helix protein, CopG family	-
JGZ36_RS07145 (JGZ36_07145)	-	1460940..1461602 (+)	663	WP_015729172.1	hypothetical protein	-
JGZ36_RS07150 (JGZ36_07150)	-	1461592..1461924 (+)	333	WP_199274060.1	hypothetical protein	-
JGZ36_RS07155 (JGZ36_07155)	-	1462015..1463166 (+)	1152	WP_015729170.1	SNF2-related protein	-
JGZ36_RS14640 (JGZ36_07160)	-	1463166..1464086 (+)	921	WP_199274061.1	phosphoadenosine phosphosulfate reductase family protein	-
JGZ36_RS14645 (JGZ36_07165)	-	1464020..1464457 (+)	438	WP_199274096.1	DUF3440 domain-containing protein	-
JGZ36_RS07170 (JGZ36_07170)	-	1464451..1464957 (+)	507	WP_198463136.1	ParB/RepB/Spo0J family partition protein	-
JGZ36_RS07175 (JGZ36_07175)	comGA	1465070..1465594 (+)	525	WP_256726570.1	ATPase, T2SS/T4P/T4SS family	Machinery gene
JGZ36_RS07180 (JGZ36_07180)	comGB	1465563..1466630 (+)	1068	WP_037542939.1	competence type IV pilus assembly protein ComGB	-
JGZ36_RS07185 (JGZ36_07185)	comGC	1466643..1466966 (+)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
JGZ36_RS07190 (JGZ36_07190)	comGD	1466944..1467384 (+)	441	WP_014613823.1	competence type IV pilus minor pilin ComGD	-
JGZ36_RS14650 (JGZ36_07195)	-	1467456..1467689 (+)	234	WP_014613824.1	hypothetical protein	-
JGZ36_RS07200 (JGZ36_07200)	-	1467595..1468080 (+)	486	WP_081378286.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
JGZ36_RS07205 (JGZ36_07205)	-	1468244..1468771 (+)	528	WP_014613826.1	shikimate kinase	-
JGZ36_RS07210 (JGZ36_07210)	gcvT	1468929..1470019 (+)	1091	Protein_1389	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 174 a.a.
• Molecular weight: 19960.92 Da
• Isoelectric Point: 6.3729

>NTDB_id=522075 JGZ36_RS07175 WP_256726570.1 1465070..1465594(+) (comGA) [Staphylococcus pseudintermedius strain DG064]
MFLYTYTHVYITFQYPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTI
HANDCQGVLLRLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNK
EGVIDEKILRKYTI

Nucleotide

• Length: 525 bp

>NTDB_id=522075 JGZ36_RS07175 WP_256726570.1 1465070..1465594(+) (comGA) [Staphylococcus pseudintermedius strain DG064]
ATGTTTTTGTACACCTATACACACGTATACATCACATTCCAGTATCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAAT
TTCCGTTAACGAAAAAGCTGATATTACGTATGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAA
TTGGTGAGATTCGTGACAGTCATATTGCAAGGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATA
CACGCCAATGATTGTCAAGGGGTGCTCCTTAGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAA
TCTCATCATCAATCAAAGACTCATTACAACAAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGA
TTCATTACTTTTTGAATAATAACTTCCAACTACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAA
GAGGGGGTTATAGATGAAAAGATTTTACGAAAGTATACGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	59.259	93.103	0.552
comGA	Staphylococcus aureus N315	59.259	93.103	0.552