Detailed information NTG0520763

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: JE032_RS30035
• Genome accession: NZ_CP066546
• Coordinates: 6696658..6697986 (+)
• Length: 442 a.a.
• NCBI ID: WP_009050935.1
• Uniprot ID: A0AB33WW27
• Organism: Pseudomonas chlororaphis subsp. aureofaciens strain SPS-41
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 6691658..6702986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JE032_RS30015	pgeF	6693157..6693882 (-)	726	WP_009050932.1	peptidoglycan editing factor PgeF	-
JE032_RS30020	rluD	6693879..6694841 (-)	963	WP_009050933.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
JE032_RS30025	-	6694994..6696016 (+)	1023	WP_009050934.1	outer membrane protein assembly factor BamD	-
JE032_RS30030	-	6696151..6696384 (+)	234	WP_007924721.1	PP0621 family protein	-
JE032_RS30035	pilR	6696658..6697986 (+)	1329	WP_009050935.1	sigma-54-dependent transcriptional regulator	Regulator
JE032_RS30040	thiO	6697983..6699083 (-)	1101	WP_009050936.1	glycine oxidase ThiO	-
JE032_RS30045	-	6699138..6699539 (-)	402	WP_009050937.1	type IV pilin protein	-
JE032_RS30050	-	6699553..6702624 (-)	3072	WP_028683448.1	pilus assembly protein	-

Sequence

Protein

• Length: 442 a.a.
• Molecular weight: 48853.37 Da
• Isoelectric Point: 9.3790

>NTDB_id=520763 JE032_RS30035 WP_009050935.1 6696658..6697986(+) (pilR) [Pseudomonas chlororaphis subsp. aureofaciens strain SPS-41]
MSPQQKVLIVDDDPGIREYLEISLGRMQRHTRSARTLGEARHWLAREGFDLCLSDLHLPDGTGLELLEHIQRHRLRMPLA
ILSTCARQETAVRVLKAGAIDFLSKPVALARLRELLNGALPKSIPPKPVTGPLLGNSTAMHKLRGQIHKLAQSQASVYIS
GESGSGKELAARAIHDQGPRASQGFVPINCGAIPPELMESEFFGHRKGSFSGAVEDKPGLFQAAHGGTLFLDEVADLPLA
MQVKLLRALQEKAVRCVGGQQEVQVDVRILCATHKTLQAEVHAGRFRQDLYYRLNVIELAVPPLRARKADIEPLATAILE
RLAQGNGQQLARLQPGALLALQGYDFPGNVRELENLLERAHTLCENRQIEARDLQLTPNGAHPAIAPGPAQVIDLEGYLQ
EVERRLILQALEHTRWNRTAAAQRLSLSFRSMRYRLKKLGLD

Nucleotide

• Length: 1329 bp

>NTDB_id=520763 JE032_RS30035 WP_009050935.1 6696658..6697986(+) (pilR) [Pseudomonas chlororaphis subsp. aureofaciens strain SPS-41]
ATGAGCCCACAGCAAAAAGTCCTGATCGTCGATGACGATCCAGGCATTCGCGAATATCTGGAAATCAGCCTCGGCCGGAT
GCAGCGCCATACCCGTAGCGCCCGCACCCTGGGTGAAGCGCGTCACTGGCTGGCCCGGGAAGGTTTCGACCTGTGCCTGA
GCGACCTGCATCTGCCCGACGGCACGGGGTTGGAATTACTCGAGCATATCCAGCGCCACCGGCTGCGAATGCCACTGGCC
ATCCTCAGCACCTGCGCCCGCCAGGAAACCGCGGTCCGGGTCCTGAAGGCCGGCGCCATCGACTTCCTGAGCAAACCCGT
GGCCCTGGCCCGCTTGCGCGAGCTACTGAACGGCGCCCTGCCCAAATCGATACCACCGAAGCCTGTTACTGGCCCCTTGC
TGGGCAATTCGACCGCCATGCACAAACTGCGTGGACAGATCCACAAACTGGCCCAGAGTCAGGCCTCGGTCTATATCAGC
GGAGAGTCCGGCAGCGGCAAGGAACTGGCCGCCCGCGCGATCCACGACCAGGGACCACGGGCCAGCCAGGGCTTCGTGCC
GATCAACTGCGGGGCTATTCCGCCGGAACTGATGGAGAGCGAGTTTTTCGGCCATCGCAAAGGCAGCTTCAGCGGTGCCG
TCGAAGACAAACCCGGCCTGTTCCAGGCAGCGCACGGCGGCACCCTGTTTCTCGATGAGGTGGCCGATCTGCCACTGGCA
ATGCAGGTCAAATTGCTCCGTGCGCTCCAGGAGAAGGCGGTGCGCTGTGTCGGCGGACAGCAGGAGGTCCAGGTTGATGT
GCGCATTCTCTGCGCCACCCACAAGACGCTGCAGGCGGAAGTGCATGCCGGACGCTTTCGCCAGGATCTCTACTACCGCC
TCAACGTGATCGAACTGGCGGTGCCACCGCTACGGGCGCGCAAGGCTGATATCGAACCCTTGGCCACAGCCATCCTCGAG
CGCCTGGCACAGGGCAACGGCCAACAGTTGGCGCGGCTCCAGCCAGGCGCGCTGCTGGCACTCCAGGGCTACGACTTTCC
CGGCAACGTGCGCGAGCTGGAGAACCTGCTCGAACGGGCGCACACCCTGTGCGAGAACCGGCAGATCGAAGCACGCGACC
TGCAACTGACACCAAACGGCGCACACCCGGCCATCGCGCCCGGCCCGGCACAGGTGATCGACCTTGAAGGTTATCTGCAG
GAAGTCGAGCGCCGGCTGATCCTCCAGGCCCTGGAGCACACCCGCTGGAACCGCACGGCGGCGGCCCAGCGCTTGAGCCT
GTCGTTTCGTTCGATGCGCTACAGGCTGAAGAAACTCGGCCTGGATTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-116)

• Bacterial regulatory protein, Fis family (HTH_8) (399-439)

• Sigma-54 interaction domain (Sigma54_activat) (133-299)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	66.366	100	0.665
pilR	Acinetobacter baumannii strain A118	43.562	100	0.459