Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   JF649_RS00330 Genome accession   NZ_CP066541
Coordinates   54240..54338 (+) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS270     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49240..59338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JF649_RS00315 (JF649_00320) - 50100..51797 (+) 1698 WP_129321629.1 AIPR family protein -
  JF649_RS00320 (JF649_00325) purB 51815..53107 (+) 1293 WP_129321630.1 adenylosuccinate lyase -
  JF649_RS00325 (JF649_00330) comR 53238..54149 (+) 912 WP_020904818.1 XRE family transcriptional regulator Regulator
  JF649_RS00330 comS 54240..54338 (+) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  JF649_RS00335 (JF649_00335) ruvB 54369..55367 (+) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  JF649_RS00340 (JF649_00340) - 55505..55942 (+) 438 WP_002994668.1 low molecular weight phosphotyrosine protein phosphatase -
  JF649_RS00345 (JF649_00345) - 55965..56366 (+) 402 WP_011017240.1 MORN repeat-containing protein -
  JF649_RS00350 (JF649_00350) - 56363..58138 (+) 1776 WP_129321631.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=520663 JF649_RS00330 WP_020833188.1 54240..54338(+) (comS) [Streptococcus pyogenes strain MGAS270]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=520663 JF649_RS00330 WP_020833188.1 54240..54338(+) (comS) [Streptococcus pyogenes strain MGAS270]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437