Detailed information NTG0520558

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JEQ22_RS17185
• Genome accession: NZ_CP066501
• Coordinates: 3447803..3448966 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain ID-A02
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3442803..3453966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JEQ22_RS17155 (JEQ22_17045)	-	3443068..3443487 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
JEQ22_RS17160 (JEQ22_17050)	comFC	3443561..3444250 (-)	690	WP_217425079.1	phosphoribosyltransferase family protein	Machinery gene
JEQ22_RS17165 (JEQ22_17055)	-	3444256..3444540 (-)	285	WP_017418816.1	competence protein ComFB	-
JEQ22_RS17170 (JEQ22_17060)	comFA	3444598..3445983 (-)	1386	WP_237586808.1	DEAD/DEAH box helicase	Machinery gene
JEQ22_RS17175 (JEQ22_17065)	-	3446091..3446939 (-)	849	WP_237586810.1	DegV family protein	-
JEQ22_RS17180 (JEQ22_17070)	degU	3447037..3447726 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
JEQ22_RS17185 (JEQ22_17075)	degS	3447803..3448966 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
JEQ22_RS17190 (JEQ22_17080)	-	3449189..3449836 (+)	648	WP_007407485.1	YigZ family protein	-
JEQ22_RS17195 (JEQ22_17085)	-	3449841..3451034 (+)	1194	WP_151140083.1	LCP family protein	-
JEQ22_RS17200 (JEQ22_17090)	-	3451134..3452210 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
JEQ22_RS17205 (JEQ22_17095)	-	3452342..3453538 (-)	1197	WP_237586812.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=520558 JEQ22_RS17185 WP_007407484.1 3447803..3448966(-) (degS) [Bacillus velezensis strain ID-A02]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=520558 JEQ22_RS17185 WP_007407484.1 3447803..3448966(-) (degS) [Bacillus velezensis strain ID-A02]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGAAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCAGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951