Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JEQ22_RS01970 Genome accession   NZ_CP066501
Coordinates   393343..394296 (+) Length   317 a.a.
NCBI ID   WP_014416904.1    Uniprot ID   -
Organism   Bacillus velezensis strain ID-A02     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 388343..399296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ22_RS01945 (JEQ22_01930) - 388388..389821 (+) 1434 WP_237586938.1 HAMP domain-containing sensor histidine kinase -
  JEQ22_RS01950 (JEQ22_01935) rapC 389974..391122 (+) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  JEQ22_RS01955 (JEQ22_01940) phrC 391106..391225 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  JEQ22_RS01960 (JEQ22_01945) - 391375..391470 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  JEQ22_RS01965 (JEQ22_01950) - 391565..392929 (-) 1365 WP_025649998.1 aspartate kinase -
  JEQ22_RS01970 (JEQ22_01955) ceuB 393343..394296 (+) 954 WP_014416904.1 ABC transporter permease Machinery gene
  JEQ22_RS01975 (JEQ22_01960) - 394286..395233 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  JEQ22_RS01980 (JEQ22_01965) - 395227..395985 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -
  JEQ22_RS01985 (JEQ22_01970) - 396007..396951 (+) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  JEQ22_RS01990 (JEQ22_01975) - 396993..398417 (-) 1425 WP_104843086.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=520501 JEQ22_RS01970 WP_014416904.1 393343..394296(+) (ceuB) [Bacillus velezensis strain ID-A02]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRLIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=520501 JEQ22_RS01970 WP_014416904.1 393343..394296(+) (ceuB) [Bacillus velezensis strain ID-A02]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCAACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCCCACAC
CGCTCTCTTGGGCGCTGTTTTTGTACTGTTTTGCGACATTTTGGGAAGGTTGATCATTTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.114

99.685

0.539